RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 V9GYY9 64 aa7.13□□□□□ -1.27
TNRC18-208ENST00000455076 Q1T7F1 81 aa7.09□□□□□ -1.27
TNRC18-208ENST00000455076 KRTAP12-3P60328 96 aa7.06□□□□□ -1.28
TNRC18-208ENST00000455076 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
TNRC18-208ENST00000455076 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
TNRC18-208ENST00000455076 K7ERS5 55 aa7.01□□□□□ -1.29
TNRC18-208ENST00000455076 PSPHP1O15172 72 aa7.01□□□□□ -1.29
TNRC18-208ENST00000455076 LCE4AQ5TA78 99 aa7□□□□□ -1.29
TNRC18-208ENST00000455076 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
TNRC18-208ENST00000455076 HMCN1Q96RW7 5635 aa6.94□□□□□ -1.3
TNRC18-208ENST00000455076 LCE1DQ5T752 114 aa6.94□□□□□ -1.3
TNRC18-208ENST00000455076 KRTAP5-4Q6L8H1 288 aa6.92□□□□□ -1.3
TNRC18-208ENST00000455076 GPR98Q8WXG9 6306 aa6.91□□□□□ -1.3
TNRC18-208ENST00000455076 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
TNRC18-208ENST00000455076 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
TNRC18-208ENST00000455076 MT4P47944 62 aa6.82□□□□□ -1.32
TNRC18-208ENST00000455076 A6NED7 52 aa6.79□□□□□ -1.32
TNRC18-208ENST00000455076 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
TNRC18-208ENST00000455076 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
TNRC18-208ENST00000455076 KRTAP5-5Q701N2 237 aaPredicted RBP6.69□□□□□ -1.34
TNRC18-208ENST00000455076 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
TNRC18-208ENST00000455076 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
TNRC18-208ENST00000455076 AHNAK2Q8IVF2 5795 aa6.65□□□□□ -1.34
TNRC18-208ENST00000455076 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
TNRC18-208ENST00000455076 PCP4P48539 62 aa6.62□□□□□ -1.35
TNRC18-208ENST00000455076 ROMO1P60602 79 aa6.56□□□□□ -1.36
TNRC18-208ENST00000455076 LCE3CQ5T5A8 94 aa6.51□□□□□ -1.37
TNRC18-208ENST00000455076 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
TNRC18-208ENST00000455076 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
TNRC18-208ENST00000455076 KRTAP20-2Q3LI61 65 aa6.48□□□□□ -1.37
TNRC18-208ENST00000455076 SYNE1Q8NF91 8797 aaKnown RBP6.47□□□□□ -1.37
TNRC18-208ENST00000455076 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
TNRC18-208ENST00000455076 KRTAP12-4P60329 112 aa6.42□□□□□ -1.38
TNRC18-208ENST00000455076 KRTAP5-3Q6L8H2 238 aa6.31□□□□□ -1.4
TNRC18-208ENST00000455076 MT1AP04731 61 aa6.21□□□□□ -1.42
TNRC18-208ENST00000455076 KRTAP5-7Q6L8G8 165 aa6.2□□□□□ -1.42
TNRC18-208ENST00000455076 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.42
TNRC18-208ENST00000455076 KRTAP6-1Q3LI64 71 aa6.14□□□□□ -1.43
TNRC18-208ENST00000455076 KRTAP5-2Q701N4 177 aa6.08□□□□□ -1.44
TNRC18-208ENST00000455076 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
TNRC18-208ENST00000455076 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
TNRC18-208ENST00000455076 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
TNRC18-208ENST00000455076 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
TNRC18-208ENST00000455076 KRTAP5-8O75690 187 aa5.71□□□□□ -1.5
TNRC18-208ENST00000455076 MT3P25713 68 aa5.66□□□□□ -1.5
TNRC18-208ENST00000455076 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
TNRC18-208ENST00000455076 MUC5BQ9HC84 5762 aaPredicted RBP5.51□□□□□ -1.53
TNRC18-208ENST00000455076 PMAIP1Q13794 54 aa5.5□□□□□ -1.53
TNRC18-208ENST00000455076 AHNAKQ09666 5890 aaKnown RBP5.45□□□□□ -1.54
TNRC18-208ENST00000455076 KRTAP5-1Q6L8H4 278 aa5.42□□□□□ -1.54
TNRC18-208ENST00000455076 MUC5ACP98088 5654 aa5.42□□□□□ -1.54
TNRC18-208ENST00000455076 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
TNRC18-208ENST00000455076 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
TNRC18-208ENST00000455076 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
TNRC18-208ENST00000455076 PRO0628Q9UI54 55 aa5.14□□□□□ -1.59
TNRC18-208ENST00000455076 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
TNRC18-208ENST00000455076 H3BS24 57 aa4.98□□□□□ -1.61
TNRC18-208ENST00000455076 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
TNRC18-208ENST00000455076 KRTAP4-2Q9BYR5 136 aa4.92□□□□□ -1.62
TNRC18-208ENST00000455076 LCE1CQ5T751 118 aa4.85□□□□□ -1.63
TNRC18-208ENST00000455076 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
TNRC18-208ENST00000455076 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
TNRC18-208ENST00000455076 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
TNRC18-208ENST00000455076 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
TNRC18-208ENST00000455076 LCE3EQ5T5B0 92 aa4.43□□□□□ -1.7
TNRC18-208ENST00000455076 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
TNRC18-208ENST00000455076 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
TNRC18-208ENST00000455076 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
TNRC18-208ENST00000455076 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
TNRC18-208ENST00000455076 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
TNRC18-208ENST00000455076 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
TNRC18-208ENST00000455076 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
TNRC18-208ENST00000455076 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
TNRC18-208ENST00000455076 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
TNRC18-208ENST00000455076 PRM1P04553 51 aa3.34□□□□□ -1.87
TNRC18-208ENST00000455076 INE1O15225 51 aa2.9□□□□□ -1.95
TNRC18-208ENST00000455076 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
TNRC18-208ENST00000455076 MUC16Q8WXI7 14507 aa2.47□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 110.5 ms