RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
HERC3-207ENST00000452979 KRTAP19-3Q7Z4W3 81 aa4.38□□□□□ -1.71
HERC3-207ENST00000452979 CDC42SE1Q9NRR8 79 aa4.37□□□□□ -1.71
HERC3-207ENST00000452979 MT1EP04732 61 aa4.36□□□□□ -1.71
HERC3-207ENST00000452979 LCE1DQ5T752 114 aa4.36□□□□□ -1.71
HERC3-207ENST00000452979 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
HERC3-207ENST00000452979 K7ERS5 55 aa4.3□□□□□ -1.72
HERC3-207ENST00000452979 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
HERC3-207ENST00000452979 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
HERC3-207ENST00000452979 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
HERC3-207ENST00000452979 MT1GP13640 62 aa4.27□□□□□ -1.73
HERC3-207ENST00000452979 MT4P47944 62 aa4.25□□□□□ -1.73
HERC3-207ENST00000452979 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
HERC3-207ENST00000452979 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
HERC3-207ENST00000452979 KRTAP5-10Q6L8G5 202 aa4.21□□□□□ -1.74
HERC3-207ENST00000452979 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
HERC3-207ENST00000452979 TNP1P09430 55 aa4.2□□□□□ -1.74
HERC3-207ENST00000452979 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
HERC3-207ENST00000452979 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
HERC3-207ENST00000452979 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
HERC3-207ENST00000452979 KRTAP5-4Q6L8H1 288 aa4.18□□□□□ -1.74
HERC3-207ENST00000452979 MT1MQ8N339 61 aa4.17□□□□□ -1.74
HERC3-207ENST00000452979 ROMO1P60602 79 aa4.13□□□□□ -1.75
HERC3-207ENST00000452979 KRTAP25-1Q3LHN0 102 aa4.13□□□□□ -1.75
HERC3-207ENST00000452979 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
HERC3-207ENST00000452979 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
HERC3-207ENST00000452979 MT1LQ93083 61 aa4.11□□□□□ -1.75
HERC3-207ENST00000452979 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
HERC3-207ENST00000452979 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
HERC3-207ENST00000452979 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
HERC3-207ENST00000452979 KRTAP5-3Q6L8H2 238 aa4.04□□□□□ -1.76
HERC3-207ENST00000452979 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
HERC3-207ENST00000452979 KRTAP9-4Q9BYQ2 154 aa4□□□□□ -1.77
HERC3-207ENST00000452979 PMAIP1Q13794 54 aa3.97□□□□□ -1.77
HERC3-207ENST00000452979 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
HERC3-207ENST00000452979 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
HERC3-207ENST00000452979 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
HERC3-207ENST00000452979 KRTAP4-7Q9BYR0 210 aa3.89□□□□□ -1.79
HERC3-207ENST00000452979 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
HERC3-207ENST00000452979 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
HERC3-207ENST00000452979 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
HERC3-207ENST00000452979 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
HERC3-207ENST00000452979 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
HERC3-207ENST00000452979 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
HERC3-207ENST00000452979 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
HERC3-207ENST00000452979 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
HERC3-207ENST00000452979 KRTAP5-2Q701N4 177 aa3.61□□□□□ -1.83
HERC3-207ENST00000452979 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
HERC3-207ENST00000452979 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
HERC3-207ENST00000452979 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
HERC3-207ENST00000452979 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
HERC3-207ENST00000452979 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
HERC3-207ENST00000452979 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
HERC3-207ENST00000452979 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
HERC3-207ENST00000452979 MT1AP04731 61 aa3.5□□□□□ -1.85
HERC3-207ENST00000452979 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
HERC3-207ENST00000452979 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
HERC3-207ENST00000452979 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
HERC3-207ENST00000452979 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
HERC3-207ENST00000452979 MT3P25713 68 aa3.22□□□□□ -1.89
HERC3-207ENST00000452979 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
HERC3-207ENST00000452979 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
HERC3-207ENST00000452979 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
HERC3-207ENST00000452979 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
HERC3-207ENST00000452979 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
HERC3-207ENST00000452979 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
HERC3-207ENST00000452979 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
HERC3-207ENST00000452979 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
HERC3-207ENST00000452979 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
HERC3-207ENST00000452979 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
HERC3-207ENST00000452979 INE1O15225 51 aa2.54□□□□□ -2
HERC3-207ENST00000452979 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
HERC3-207ENST00000452979 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
HERC3-207ENST00000452979 PRM1P04553 51 aa2.16□□□□□ -2.06
HERC3-207ENST00000452979 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
HERC3-207ENST00000452979 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
HERC3-207ENST00000452979 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
HERC3-207ENST00000452979 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 178.7 ms