RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 LRP1Q07954 4544 aaKnown RBP0.6□□□□□ -2.31
VPS8-212ENST00000452666 RYR2Q92736 4967 aa0.6□□□□□ -2.31
VPS8-212ENST00000452666 DNAH10Q8IVF4 4471 aa0.6□□□□□ -2.31
VPS8-212ENST00000452666 EPPK1P58107 5090 aaKnown RBP0.6□□□□□ -2.31
VPS8-212ENST00000452666 DNAH1Q9P2D7 4330 aa0.6□□□□□ -2.31
VPS8-212ENST00000452666 DNAH9Q9NYC9 4486 aa0.6□□□□□ -2.31
VPS8-212ENST00000452666 CSMD2Q7Z408 3487 aa0.6□□□□□ -2.31
VPS8-212ENST00000452666 PCLOQ9Y6V0 5065 aa0.6□□□□□ -2.31
VPS8-212ENST00000452666 IGSF10Q6WRI0 2623 aa0.6□□□□□ -2.31
VPS8-212ENST00000452666 TEX15Q9BXT5 2789 aa0.6□□□□□ -2.31
VPS8-212ENST00000452666 APOBP04114 4563 aaKnown RBP0.59□□□□□ -2.31
VPS8-212ENST00000452666 FLNAP21333 2647 aaKnown RBP0.59□□□□□ -2.31
VPS8-212ENST00000452666 SVEP1Q4LDE5 3571 aa0.59□□□□□ -2.31
VPS8-212ENST00000452666 SPRR2EP22531 72 aa0.59□□□□□ -2.31
VPS8-212ENST00000452666 RYR1P21817 5038 aa0.59□□□□□ -2.32
VPS8-212ENST00000452666 HYDINQ4G0P3 5121 aa0.59□□□□□ -2.32
VPS8-212ENST00000452666 NBEAL1Q6ZS30 2694 aa0.59□□□□□ -2.32
VPS8-212ENST00000452666 MGAM2Q2M2H8 2515 aa0.59□□□□□ -2.32
VPS8-212ENST00000452666 VPS13CQ709C8 3753 aa0.58□□□□□ -2.32
VPS8-212ENST00000452666 LPAP08519 4548 aa0.58□□□□□ -2.32
VPS8-212ENST00000452666 HERC2O95714 4834 aa0.58□□□□□ -2.32
VPS8-212ENST00000452666 KMT2CQ8NEZ4 4911 aaKnown RBP0.57□□□□□ -2.32
VPS8-212ENST00000452666 STARD9Q9P2P6 4700 aa0.57□□□□□ -2.32
VPS8-212ENST00000452666 PLECQ15149 4684 aaKnown RBP0.56□□□□□ -2.32
VPS8-212ENST00000452666 KIAA1109Q2LD37 5005 aa0.56□□□□□ -2.32
VPS8-212ENST00000452666 ABCA13Q86UQ4 5058 aa0.56□□□□□ -2.32
VPS8-212ENST00000452666 TRRAPQ9Y4A5 3859 aa0.56□□□□□ -2.32
VPS8-212ENST00000452666 GPR98Q8WXG9 6306 aa0.55□□□□□ -2.32
VPS8-212ENST00000452666 FAT1Q14517 4588 aa0.55□□□□□ -2.32
VPS8-212ENST00000452666 DYNC1H1Q14204 4646 aaKnown RBP0.55□□□□□ -2.32
VPS8-212ENST00000452666 HERC1Q15751 4861 aa0.55□□□□□ -2.32
VPS8-212ENST00000452666 SYNE1Q8NF91 8797 aaKnown RBP0.54□□□□□ -2.32
VPS8-212ENST00000452666 UBR4Q5T4S7 5183 aa0.53□□□□□ -2.32
VPS8-212ENST00000452666 CENPEQ02224 2701 aa0.53□□□□□ -2.32
VPS8-212ENST00000452666 DNAH17Q9UFH2 4485 aa0.52□□□□□ -2.33
VPS8-212ENST00000452666 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
VPS8-212ENST00000452666 PKHD1P08F94 4074 aa0.52□□□□□ -2.33
VPS8-212ENST00000452666 MT1EP04732 61 aa0.51□□□□□ -2.33
VPS8-212ENST00000452666 DNAH5Q8TE73 4624 aa0.51□□□□□ -2.33
VPS8-212ENST00000452666 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
VPS8-212ENST00000452666 LRP1BQ9NZR2 4599 aa0.5□□□□□ -2.33
VPS8-212ENST00000452666 RNF213Q63HN8 5207 aa0.48□□□□□ -2.33
VPS8-212ENST00000452666 MT1HP80294 61 aa0.48□□□□□ -2.33
VPS8-212ENST00000452666 SYNE2Q8WXH0 6885 aaKnown RBP0.48□□□□□ -2.33
VPS8-212ENST00000452666 STAB2Q8WWQ8 2551 aa0.47□□□□□ -2.33
VPS8-212ENST00000452666 MT1LQ93083 61 aa0.47□□□□□ -2.33
VPS8-212ENST00000452666 HMCN2Q8NDA2 5059 aa0.47□□□□□ -2.33
VPS8-212ENST00000452666 FSIP2Q5CZC0 6907 aa0.47□□□□□ -2.33
VPS8-212ENST00000452666 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
VPS8-212ENST00000452666 LRP2P98164 4655 aa0.45□□□□□ -2.34
VPS8-212ENST00000452666 MUC17Q685J3 4493 aa0.44□□□□□ -2.34
VPS8-212ENST00000452666 MACF1Q9UPN3 7388 aaKnown RBP0.44□□□□□ -2.34
VPS8-212ENST00000452666 SPRR2GQ9BYE4 73 aa0.44□□□□□ -2.34
VPS8-212ENST00000452666 MUC2Q02817 5179 aa0.43□□□□□ -2.34
VPS8-212ENST00000452666 NEBP20929 6669 aa0.43□□□□□ -2.34
VPS8-212ENST00000452666 MDN1Q9NU22 5596 aa0.41□□□□□ -2.34
VPS8-212ENST00000452666 MT1XP80297 61 aa0.4□□□□□ -2.35
VPS8-212ENST00000452666 MUC12Q9UKN1 5478 aa0.4□□□□□ -2.35
VPS8-212ENST00000452666 USH2AO75445 5202 aa0.39□□□□□ -2.35
VPS8-212ENST00000452666 SSPOA2VEC9 5147 aa0.39□□□□□ -2.35
VPS8-212ENST00000452666 MT1HL1P0DM35 61 aa0.39□□□□□ -2.35
VPS8-212ENST00000452666 KRTAP20-1Q3LI63 56 aa0.39□□□□□ -2.35
VPS8-212ENST00000452666 MUC5ACP98088 5654 aa0.38□□□□□ -2.35
VPS8-212ENST00000452666 MT1GP13640 62 aa0.37□□□□□ -2.35
VPS8-212ENST00000452666 KMT2DO14686 5537 aa0.36□□□□□ -2.35
VPS8-212ENST00000452666 MT4P47944 62 aa0.35□□□□□ -2.35
VPS8-212ENST00000452666 DSTQ03001 7570 aaKnown RBP0.35□□□□□ -2.35
VPS8-212ENST00000452666 MT1FP04733 61 aa0.34□□□□□ -2.36
VPS8-212ENST00000452666 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
VPS8-212ENST00000452666 MT2AP02795 61 aa0.33□□□□□ -2.36
VPS8-212ENST00000452666 KRTAP19-6Q3LI70 58 aa0.33□□□□□ -2.36
VPS8-212ENST00000452666 KRTAP19-8Q3LI54 63 aa0.32□□□□□ -2.36
VPS8-212ENST00000452666 KRTAP19-2Q3LHN2 52 aa0.29□□□□□ -2.36
VPS8-212ENST00000452666 KRTAP6-1Q3LI64 71 aa0.28□□□□□ -2.36
VPS8-212ENST00000452666 KRTAP19-7Q3SYF9 63 aa0.28□□□□□ -2.36
VPS8-212ENST00000452666 MT1MQ8N339 61 aa0.28□□□□□ -2.36
VPS8-212ENST00000452666 MT1BP07438 61 aa0.27□□□□□ -2.37
VPS8-212ENST00000452666 KRTAP20-2Q3LI61 65 aa0.22□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms