RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 MIR22HGQ0VDD5 57 aa6.62□□□□□ -1.35
PDLIM2-214ENST00000452226 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
PDLIM2-214ENST00000452226 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
PDLIM2-214ENST00000452226 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
PDLIM2-214ENST00000452226 PSPHP1O15172 72 aa6.57□□□□□ -1.36
PDLIM2-214ENST00000452226 HMCN1Q96RW7 5635 aa6.55□□□□□ -1.36
PDLIM2-214ENST00000452226 MT4P47944 62 aa6.54□□□□□ -1.36
PDLIM2-214ENST00000452226 MT1MQ8N339 61 aa6.54□□□□□ -1.36
PDLIM2-214ENST00000452226 MT1LQ93083 61 aa6.52□□□□□ -1.37
PDLIM2-214ENST00000452226 K7ERS5 55 aa6.45□□□□□ -1.38
PDLIM2-214ENST00000452226 PCP4P48539 62 aa6.42□□□□□ -1.38
PDLIM2-214ENST00000452226 RPS28P62857 69 aaKnown RBP6.42□□□□□ -1.38
PDLIM2-214ENST00000452226 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
PDLIM2-214ENST00000452226 AHNAK2Q8IVF2 5795 aa6.41□□□□□ -1.38
PDLIM2-214ENST00000452226 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.38
PDLIM2-214ENST00000452226 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
PDLIM2-214ENST00000452226 KRTAP5-4Q6L8H1 288 aa6.35□□□□□ -1.39
PDLIM2-214ENST00000452226 A6NED7 52 aa6.34□□□□□ -1.39
PDLIM2-214ENST00000452226 KRTAP5-10Q6L8G5 202 aa6.33□□□□□ -1.4
PDLIM2-214ENST00000452226 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
PDLIM2-214ENST00000452226 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
PDLIM2-214ENST00000452226 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
PDLIM2-214ENST00000452226 KRTAP5-7Q6L8G8 165 aa6.15□□□□□ -1.42
PDLIM2-214ENST00000452226 CDC42SE1Q9NRR8 79 aa6.14□□□□□ -1.43
PDLIM2-214ENST00000452226 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
PDLIM2-214ENST00000452226 ROMO1P60602 79 aa6.07□□□□□ -1.44
PDLIM2-214ENST00000452226 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
PDLIM2-214ENST00000452226 KRTAP20-2Q3LI61 65 aa6.02□□□□□ -1.45
PDLIM2-214ENST00000452226 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
PDLIM2-214ENST00000452226 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
PDLIM2-214ENST00000452226 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
PDLIM2-214ENST00000452226 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
PDLIM2-214ENST00000452226 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
PDLIM2-214ENST00000452226 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
PDLIM2-214ENST00000452226 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
PDLIM2-214ENST00000452226 KRTAP4-11Q9BYQ6 195 aa5.6□□□□□ -1.51
PDLIM2-214ENST00000452226 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
PDLIM2-214ENST00000452226 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
PDLIM2-214ENST00000452226 MT1AP04731 61 aa5.54□□□□□ -1.52
PDLIM2-214ENST00000452226 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
PDLIM2-214ENST00000452226 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
PDLIM2-214ENST00000452226 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
PDLIM2-214ENST00000452226 MUC5ACP98088 5654 aa5.4□□□□□ -1.55
PDLIM2-214ENST00000452226 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
PDLIM2-214ENST00000452226 KRTAP9-4Q9BYQ2 154 aa5.38□□□□□ -1.55
PDLIM2-214ENST00000452226 KRTAP6-2Q3LI66 62 aa5.33□□□□□ -1.56
PDLIM2-214ENST00000452226 MUC5BQ9HC84 5762 aaPredicted RBP5.31□□□□□ -1.56
PDLIM2-214ENST00000452226 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
PDLIM2-214ENST00000452226 PMAIP1Q13794 54 aa5.27□□□□□ -1.57
PDLIM2-214ENST00000452226 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
PDLIM2-214ENST00000452226 MT3P25713 68 aa5.08□□□□□ -1.6
PDLIM2-214ENST00000452226 PRO0628Q9UI54 55 aa5.07□□□□□ -1.6
PDLIM2-214ENST00000452226 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
PDLIM2-214ENST00000452226 KRTAP5-1Q6L8H4 278 aa5□□□□□ -1.61
PDLIM2-214ENST00000452226 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
PDLIM2-214ENST00000452226 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
PDLIM2-214ENST00000452226 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
PDLIM2-214ENST00000452226 SVIPQ8NHG7 77 aa4.47□□□□□ -1.69
PDLIM2-214ENST00000452226 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
PDLIM2-214ENST00000452226 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
PDLIM2-214ENST00000452226 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
PDLIM2-214ENST00000452226 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
PDLIM2-214ENST00000452226 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
PDLIM2-214ENST00000452226 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
PDLIM2-214ENST00000452226 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
PDLIM2-214ENST00000452226 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
PDLIM2-214ENST00000452226 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
PDLIM2-214ENST00000452226 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
PDLIM2-214ENST00000452226 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
PDLIM2-214ENST00000452226 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
PDLIM2-214ENST00000452226 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
PDLIM2-214ENST00000452226 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
PDLIM2-214ENST00000452226 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
PDLIM2-214ENST00000452226 PRM1P04553 51 aa3.11□□□□□ -1.91
PDLIM2-214ENST00000452226 INE1O15225 51 aa3.04□□□□□ -1.92
PDLIM2-214ENST00000452226 H3BS24 57 aa2.93□□□□□ -1.94
PDLIM2-214ENST00000452226 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
PDLIM2-214ENST00000452226 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 107.3 ms