RNA–Protein interactions for RNA: ENST00000450271.5

PBRM1-217, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-217ENST00000450271 AHNAK2Q8IVF2 5795 aa9.02□□□□□ -0.97
PBRM1-217ENST00000450271 ANAPC13Q9BS18 74 aa8.94□□□□□ -0.98
PBRM1-217ENST00000450271 KRTAP4-6Q9BYQ5 205 aa8.93□□□□□ -0.98
PBRM1-217ENST00000450271 PRR15LQ9BU68 103 aa8.9□□□□□ -0.98
PBRM1-217ENST00000450271 KRTAP4-7Q9BYR0 210 aa8.87□□□□□ -0.99
PBRM1-217ENST00000450271 KRTAP12-3P60328 96 aa8.86□□□□□ -0.99
PBRM1-217ENST00000450271 KRTAP5-10Q6L8G5 202 aa8.83□□□□□ -1
PBRM1-217ENST00000450271 CCDC179H3BU77 68 aa8.82□□□□□ -1
PBRM1-217ENST00000450271 LINC01558Q9Y6Z2 57 aa8.8□□□□□ -1
PBRM1-217ENST00000450271 ATP5EP56381 51 aaPredicted RBP8.79□□□□□ -1
PBRM1-217ENST00000450271 KRTAP5-5Q701N2 237 aaPredicted RBP8.64□□□□□ -1.03
PBRM1-217ENST00000450271 UQCR11O14957 56 aa8.61□□□□□ -1.03
PBRM1-217ENST00000450271 KRTAP20-2Q3LI61 65 aa8.58□□□□□ -1.04
PBRM1-217ENST00000450271 KRTAP5-3Q6L8H2 238 aa8.56□□□□□ -1.04
PBRM1-217ENST00000450271 KRTAP25-1Q3LHN0 102 aa8.51□□□□□ -1.05
PBRM1-217ENST00000450271 KRTAP5-7Q6L8G8 165 aa8.51□□□□□ -1.05
PBRM1-217ENST00000450271 SPRR5A0A1B0GTR4 108 aa8.5□□□□□ -1.05
PBRM1-217ENST00000450271 TMEM258P61165 79 aa8.45□□□□□ -1.06
PBRM1-217ENST00000450271 KRTAP12-4P60329 112 aa8.42□□□□□ -1.06
PBRM1-217ENST00000450271 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
PBRM1-217ENST00000450271 MIR22HGQ0VDD5 57 aa8.4□□□□□ -1.06
PBRM1-217ENST00000450271 SYNE1Q8NF91 8797 aaKnown RBP8.35□□□□□ -1.07
PBRM1-217ENST00000450271 KRTAP19-4Q3LI73 84 aa8.34□□□□□ -1.07
PBRM1-217ENST00000450271 K7ERS5 55 aa8.25□□□□□ -1.09
PBRM1-217ENST00000450271 KRTAP23-1A1A580 65 aa8.2□□□□□ -1.1
PBRM1-217ENST00000450271 KRTAP15-1Q3LI76 137 aa8.19□□□□□ -1.1
PBRM1-217ENST00000450271 LCE3CQ5T5A8 94 aa8.13□□□□□ -1.11
PBRM1-217ENST00000450271 PSPHP1O15172 72 aa8.08□□□□□ -1.12
PBRM1-217ENST00000450271 V9GYY9 64 aa8.04□□□□□ -1.12
PBRM1-217ENST00000450271 Q1T7F1 81 aa8□□□□□ -1.13
PBRM1-217ENST00000450271 MT1AP04731 61 aa7.93□□□□□ -1.14
PBRM1-217ENST00000450271 KRTAP5-2Q701N4 177 aa7.93□□□□□ -1.14
PBRM1-217ENST00000450271 KRTAP6-1Q3LI64 71 aa7.92□□□□□ -1.14
PBRM1-217ENST00000450271 KRTAP4-11Q9BYQ6 195 aa7.89□□□□□ -1.15
PBRM1-217ENST00000450271 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
PBRM1-217ENST00000450271 A6NED7 52 aa7.78□□□□□ -1.16
PBRM1-217ENST00000450271 KRTAP9-6A8MVA2 160 aa7.72□□□□□ -1.17
PBRM1-217ENST00000450271 KRTAP9-4Q9BYQ2 154 aa7.69□□□□□ -1.18
PBRM1-217ENST00000450271 ROMO1P60602 79 aa7.68□□□□□ -1.18
PBRM1-217ENST00000450271 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
PBRM1-217ENST00000450271 KRTAP5-8O75690 187 aa7.64□□□□□ -1.19
PBRM1-217ENST00000450271 KRTAP6-2Q3LI66 62 aa7.59□□□□□ -1.19
PBRM1-217ENST00000450271 MUC5BQ9HC84 5762 aaPredicted RBP7.46□□□□□ -1.21
PBRM1-217ENST00000450271 AHNAKQ09666 5890 aaKnown RBP7.45□□□□□ -1.22
PBRM1-217ENST00000450271 MUC5ACP98088 5654 aa7.42□□□□□ -1.22
PBRM1-217ENST00000450271 OBSCNQ5VST9 7968 aa7.42□□□□□ -1.22
PBRM1-217ENST00000450271 KRTAP9-9Q9BYP9 154 aa7.26□□□□□ -1.25
PBRM1-217ENST00000450271 MT3P25713 68 aa7.25□□□□□ -1.25
PBRM1-217ENST00000450271 KRTAP5-1Q6L8H4 278 aa7.16□□□□□ -1.26
PBRM1-217ENST00000450271 PCP4P48539 62 aa6.81□□□□□ -1.32
PBRM1-217ENST00000450271 LCE1EQ5T753 118 aa6.74□□□□□ -1.33
PBRM1-217ENST00000450271 KRTAP4-2Q9BYR5 136 aa6.42□□□□□ -1.38
PBRM1-217ENST00000450271 LCE1BQ5T7P3 118 aa6.34□□□□□ -1.39
PBRM1-217ENST00000450271 BRK1Q8WUW1 75 aa6.3□□□□□ -1.4
PBRM1-217ENST00000450271 LCE1CQ5T751 118 aa6.27□□□□□ -1.41
PBRM1-217ENST00000450271 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
PBRM1-217ENST00000450271 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
PBRM1-217ENST00000450271 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
PBRM1-217ENST00000450271 LCE3DQ9BYE3 92 aa5.79□□□□□ -1.48
PBRM1-217ENST00000450271 KRTAP5-11Q6L8G4 156 aa5.7□□□□□ -1.5
PBRM1-217ENST00000450271 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.69□□□□□ -1.5
PBRM1-217ENST00000450271 LCE1FQ5T754 118 aa5.59□□□□□ -1.51
PBRM1-217ENST00000450271 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
PBRM1-217ENST00000450271 H3BS24 57 aa5.25□□□□□ -1.57
PBRM1-217ENST00000450271 KRTAP21-2Q3LI59 83 aa5.23□□□□□ -1.57
PBRM1-217ENST00000450271 PHGR1C9JFL3 82 aa5.12□□□□□ -1.59
PBRM1-217ENST00000450271 PRO0628Q9UI54 55 aa5.12□□□□□ -1.59
PBRM1-217ENST00000450271 KTN1-AS1Q86SY8 53 aa5.01□□□□□ -1.61
PBRM1-217ENST00000450271 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
PBRM1-217ENST00000450271 SVIPQ8NHG7 77 aa4.85□□□□□ -1.63
PBRM1-217ENST00000450271 KRTAP4-4Q9BYR3 166 aa4.8□□□□□ -1.64
PBRM1-217ENST00000450271 MUC19Q7Z5P9 8384 aa4.59□□□□□ -1.67
PBRM1-217ENST00000450271 PRM1P04553 51 aa3.91□□□□□ -1.78
PBRM1-217ENST00000450271 KRTAP21-1Q3LI58 79 aa3.9□□□□□ -1.79
PBRM1-217ENST00000450271 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
PBRM1-217ENST00000450271 A0A0A0MQY5 61 aa3.53□□□□□ -1.84
PBRM1-217ENST00000450271 MUC16Q8WXI7 14507 aa3.3□□□□□ -1.88
PBRM1-217ENST00000450271 INE1O15225 51 aa2.74□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 177.4 ms