RNA–Protein interactions for RNA: ENST00000449538.3

HIST1H2BN-202, Transcript of histone cluster 1 H2B family member n, humanhuman

TSL 1 (best)

Gene HIST1H2BN, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BN-202ENST00000449538 MT1GP13640 62 aa6.3□□□□□ -1.4
HIST1H2BN-202ENST00000449538 K7ERS5 55 aa6.29□□□□□ -1.4
HIST1H2BN-202ENST00000449538 PP632Q6XCG6 107 aa6.27□□□□□ -1.41
HIST1H2BN-202ENST00000449538 MT1LQ93083 61 aa6.23□□□□□ -1.41
HIST1H2BN-202ENST00000449538 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
HIST1H2BN-202ENST00000449538 MT1MQ8N339 61 aa6.17□□□□□ -1.42
HIST1H2BN-202ENST00000449538 A6NED7 52 aa6.14□□□□□ -1.43
HIST1H2BN-202ENST00000449538 PCP4P48539 62 aa6.13□□□□□ -1.43
HIST1H2BN-202ENST00000449538 KRTAP12-3P60328 96 aa6.13□□□□□ -1.43
HIST1H2BN-202ENST00000449538 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
HIST1H2BN-202ENST00000449538 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
HIST1H2BN-202ENST00000449538 KRTAP4-3Q9BYR4 195 aa6□□□□□ -1.45
HIST1H2BN-202ENST00000449538 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
HIST1H2BN-202ENST00000449538 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
HIST1H2BN-202ENST00000449538 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
HIST1H2BN-202ENST00000449538 LCE4AQ5TA78 99 aa5.91□□□□□ -1.46
HIST1H2BN-202ENST00000449538 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
HIST1H2BN-202ENST00000449538 ROMO1P60602 79 aa5.85□□□□□ -1.47
HIST1H2BN-202ENST00000449538 LCE1DQ5T752 114 aa5.85□□□□□ -1.47
HIST1H2BN-202ENST00000449538 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
HIST1H2BN-202ENST00000449538 MT4P47944 62 aa5.81□□□□□ -1.48
HIST1H2BN-202ENST00000449538 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
HIST1H2BN-202ENST00000449538 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
HIST1H2BN-202ENST00000449538 HMCN1Q96RW7 5635 aa5.65□□□□□ -1.5
HIST1H2BN-202ENST00000449538 LCE3CQ5T5A8 94 aa5.65□□□□□ -1.5
HIST1H2BN-202ENST00000449538 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
HIST1H2BN-202ENST00000449538 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
HIST1H2BN-202ENST00000449538 KRTAP12-4P60329 112 aa5.5□□□□□ -1.53
HIST1H2BN-202ENST00000449538 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
HIST1H2BN-202ENST00000449538 KRTAP20-2Q3LI61 65 aa5.47□□□□□ -1.53
HIST1H2BN-202ENST00000449538 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
HIST1H2BN-202ENST00000449538 BRK1Q8WUW1 75 aa5.4□□□□□ -1.54
HIST1H2BN-202ENST00000449538 AHNAK2Q8IVF2 5795 aa5.38□□□□□ -1.55
HIST1H2BN-202ENST00000449538 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
HIST1H2BN-202ENST00000449538 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
HIST1H2BN-202ENST00000449538 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
HIST1H2BN-202ENST00000449538 MT1AP04731 61 aa5.31□□□□□ -1.56
HIST1H2BN-202ENST00000449538 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
HIST1H2BN-202ENST00000449538 KRTAP5-3Q6L8H2 238 aa5.29□□□□□ -1.56
HIST1H2BN-202ENST00000449538 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
HIST1H2BN-202ENST00000449538 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
HIST1H2BN-202ENST00000449538 KRTAP5-7Q6L8G8 165 aa5.15□□□□□ -1.59
HIST1H2BN-202ENST00000449538 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
HIST1H2BN-202ENST00000449538 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
HIST1H2BN-202ENST00000449538 PMAIP1Q13794 54 aa5.08□□□□□ -1.6
HIST1H2BN-202ENST00000449538 KRTAP6-2Q3LI66 62 aa5□□□□□ -1.61
HIST1H2BN-202ENST00000449538 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
HIST1H2BN-202ENST00000449538 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
HIST1H2BN-202ENST00000449538 MT3P25713 68 aa4.87□□□□□ -1.63
HIST1H2BN-202ENST00000449538 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
HIST1H2BN-202ENST00000449538 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
HIST1H2BN-202ENST00000449538 PRO0628Q9UI54 55 aa4.78□□□□□ -1.64
HIST1H2BN-202ENST00000449538 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
HIST1H2BN-202ENST00000449538 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
HIST1H2BN-202ENST00000449538 KRTAP5-1Q6L8H4 278 aa4.54□□□□□ -1.68
HIST1H2BN-202ENST00000449538 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
HIST1H2BN-202ENST00000449538 MUC5ACP98088 5654 aa4.4□□□□□ -1.7
HIST1H2BN-202ENST00000449538 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
HIST1H2BN-202ENST00000449538 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
HIST1H2BN-202ENST00000449538 H3BS24 57 aa4.24□□□□□ -1.73
HIST1H2BN-202ENST00000449538 LCE1BQ5T7P3 118 aa4.16□□□□□ -1.74
HIST1H2BN-202ENST00000449538 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
HIST1H2BN-202ENST00000449538 LCE1CQ5T751 118 aa4.11□□□□□ -1.75
HIST1H2BN-202ENST00000449538 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
HIST1H2BN-202ENST00000449538 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
HIST1H2BN-202ENST00000449538 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.75□□□□□ -1.81
HIST1H2BN-202ENST00000449538 A0A0A0MQY5 61 aa3.73□□□□□ -1.81
HIST1H2BN-202ENST00000449538 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
HIST1H2BN-202ENST00000449538 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
HIST1H2BN-202ENST00000449538 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
HIST1H2BN-202ENST00000449538 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
HIST1H2BN-202ENST00000449538 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
HIST1H2BN-202ENST00000449538 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
HIST1H2BN-202ENST00000449538 PRM1P04553 51 aa2.98□□□□□ -1.93
HIST1H2BN-202ENST00000449538 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
HIST1H2BN-202ENST00000449538 INE1O15225 51 aa2.74□□□□□ -1.97
HIST1H2BN-202ENST00000449538 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
HIST1H2BN-202ENST00000449538 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 8.7 ms