RNA–Protein interactions for RNA: ENST00000447696.5

MRPL28-205, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 3

Gene MRPL28, Length 722 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-205ENST00000447696 PP632Q6XCG6 107 aa8.61□□□□□ -1.03
MRPL28-205ENST00000447696 HMCN1Q96RW7 5635 aa8.6□□□□□ -1.03
MRPL28-205ENST00000447696 MT1LQ93083 61 aa8.55□□□□□ -1.04
MRPL28-205ENST00000447696 LCE4AQ5TA78 99 aa8.52□□□□□ -1.05
MRPL28-205ENST00000447696 MT1MQ8N339 61 aa8.5□□□□□ -1.05
MRPL28-205ENST00000447696 AHNAK2Q8IVF2 5795 aa8.5□□□□□ -1.05
MRPL28-205ENST00000447696 MT4P47944 62 aa8.42□□□□□ -1.06
MRPL28-205ENST00000447696 KRTAP5-10Q6L8G5 202 aa8.41□□□□□ -1.06
MRPL28-205ENST00000447696 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.06
MRPL28-205ENST00000447696 MIR22HGQ0VDD5 57 aa8.4□□□□□ -1.06
MRPL28-205ENST00000447696 V9GYY9 64 aa8.34□□□□□ -1.07
MRPL28-205ENST00000447696 KRTAP12-3P60328 96 aa8.3□□□□□ -1.08
MRPL28-205ENST00000447696 K7ERS5 55 aa8.27□□□□□ -1.09
MRPL28-205ENST00000447696 Q1T7F1 81 aa8.26□□□□□ -1.09
MRPL28-205ENST00000447696 KRTAP25-1Q3LHN0 102 aa8.26□□□□□ -1.09
MRPL28-205ENST00000447696 KRTAP4-3Q9BYR4 195 aa8.24□□□□□ -1.09
MRPL28-205ENST00000447696 PSPHP1O15172 72 aa8.23□□□□□ -1.09
MRPL28-205ENST00000447696 KRTAP5-7Q6L8G8 165 aa8.22□□□□□ -1.09
MRPL28-205ENST00000447696 KRTAP5-4Q6L8H1 288 aa8.18□□□□□ -1.1
MRPL28-205ENST00000447696 KRTAP4-6Q9BYQ5 205 aa8.1□□□□□ -1.11
MRPL28-205ENST00000447696 KRTAP4-7Q9BYR0 210 aa8.08□□□□□ -1.12
MRPL28-205ENST00000447696 KRTAP5-3Q6L8H2 238 aa8.05□□□□□ -1.12
MRPL28-205ENST00000447696 KRTAP23-1A1A580 65 aa7.98□□□□□ -1.13
MRPL28-205ENST00000447696 A6NED7 52 aa7.98□□□□□ -1.13
MRPL28-205ENST00000447696 KRTAP19-4Q3LI73 84 aa7.93□□□□□ -1.14
MRPL28-205ENST00000447696 SPRR5A0A1B0GTR4 108 aa7.84□□□□□ -1.15
MRPL28-205ENST00000447696 CDC42SE1Q9NRR8 79 aa7.82□□□□□ -1.16
MRPL28-205ENST00000447696 KRTAP5-5Q701N2 237 aaPredicted RBP7.81□□□□□ -1.16
MRPL28-205ENST00000447696 KRTAP15-1Q3LI76 137 aa7.78□□□□□ -1.16
MRPL28-205ENST00000447696 KRTAP20-2Q3LI61 65 aa7.76□□□□□ -1.17
MRPL28-205ENST00000447696 ROMO1P60602 79 aa7.69□□□□□ -1.18
MRPL28-205ENST00000447696 LCE3CQ5T5A8 94 aa7.65□□□□□ -1.18
MRPL28-205ENST00000447696 LOC100996750A0A140TA64 210 aa7.64□□□□□ -1.19
MRPL28-205ENST00000447696 KRTAP12-4P60329 112 aa7.6□□□□□ -1.19
MRPL28-205ENST00000447696 SVIPQ8NHG7 77 aa7.55□□□□□ -1.2
MRPL28-205ENST00000447696 BRK1Q8WUW1 75 aa7.47□□□□□ -1.21
MRPL28-205ENST00000447696 SYNE1Q8NF91 8797 aaKnown RBP7.44□□□□□ -1.22
MRPL28-205ENST00000447696 PRO0628Q9UI54 55 aa7.39□□□□□ -1.23
MRPL28-205ENST00000447696 AHNAKQ09666 5890 aaKnown RBP7.31□□□□□ -1.24
MRPL28-205ENST00000447696 MT1AP04731 61 aa7.29□□□□□ -1.24
MRPL28-205ENST00000447696 KRTAP4-11Q9BYQ6 195 aa7.28□□□□□ -1.24
MRPL28-205ENST00000447696 KRTAP6-1Q3LI64 71 aa7.21□□□□□ -1.26
MRPL28-205ENST00000447696 MUC5ACP98088 5654 aa7.2□□□□□ -1.26
MRPL28-205ENST00000447696 KRTAP9-6A8MVA2 160 aa7.19□□□□□ -1.26
MRPL28-205ENST00000447696 MUC5BQ9HC84 5762 aaPredicted RBP7.15□□□□□ -1.27
MRPL28-205ENST00000447696 KRTAP5-2Q701N4 177 aa7.11□□□□□ -1.27
MRPL28-205ENST00000447696 PMAIP1Q13794 54 aa7.09□□□□□ -1.27
MRPL28-205ENST00000447696 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
MRPL28-205ENST00000447696 KRTAP5-8O75690 187 aa7.02□□□□□ -1.29
MRPL28-205ENST00000447696 KRTAP6-2Q3LI66 62 aa6.88□□□□□ -1.31
MRPL28-205ENST00000447696 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
MRPL28-205ENST00000447696 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
MRPL28-205ENST00000447696 OBSCNQ5VST9 7968 aa6.81□□□□□ -1.32
MRPL28-205ENST00000447696 MT3P25713 68 aa6.67□□□□□ -1.34
MRPL28-205ENST00000447696 PRAC1Q96KF2 57 aa6.54□□□□□ -1.36
MRPL28-205ENST00000447696 KRTAP5-1Q6L8H4 278 aa6.43□□□□□ -1.38
MRPL28-205ENST00000447696 LCE1EQ5T753 118 aa6.14□□□□□ -1.43
MRPL28-205ENST00000447696 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
MRPL28-205ENST00000447696 LCE1BQ5T7P3 118 aa5.7□□□□□ -1.5
MRPL28-205ENST00000447696 LCE1CQ5T751 118 aa5.68□□□□□ -1.5
MRPL28-205ENST00000447696 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
MRPL28-205ENST00000447696 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
MRPL28-205ENST00000447696 KRTAP4-12Q9BQ66 201 aa5.31□□□□□ -1.56
MRPL28-205ENST00000447696 H3BS24 57 aa5.27□□□□□ -1.57
MRPL28-205ENST00000447696 NDUFAF8A1L188 74 aa5.24□□□□□ -1.57
MRPL28-205ENST00000447696 LCE3EQ5T5B0 92 aa5.21□□□□□ -1.58
MRPL28-205ENST00000447696 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.2□□□□□ -1.58
MRPL28-205ENST00000447696 LCE1FQ5T754 118 aa5.15□□□□□ -1.59
MRPL28-205ENST00000447696 KRTAP5-11Q6L8G4 156 aa5.15□□□□□ -1.59
MRPL28-205ENST00000447696 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
MRPL28-205ENST00000447696 PHGR1C9JFL3 82 aa4.94□□□□□ -1.62
MRPL28-205ENST00000447696 KRTAP21-2Q3LI59 83 aa4.76□□□□□ -1.65
MRPL28-205ENST00000447696 INE1O15225 51 aa4.48□□□□□ -1.69
MRPL28-205ENST00000447696 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
MRPL28-205ENST00000447696 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
MRPL28-205ENST00000447696 PRM1P04553 51 aa3.91□□□□□ -1.78
MRPL28-205ENST00000447696 KRTAP21-1Q3LI58 79 aa3.82□□□□□ -1.8
MRPL28-205ENST00000447696 MUC16Q8WXI7 14507 aa3□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 77.7 ms