RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
FN1-212ENST00000446046 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
FN1-212ENST00000446046 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
FN1-212ENST00000446046 MT1AP04731 61 aa3.41□□□□□ -1.86
FN1-212ENST00000446046 PRM1P04553 51 aa3.4□□□□□ -1.87
FN1-212ENST00000446046 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
FN1-212ENST00000446046 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
FN1-212ENST00000446046 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
FN1-212ENST00000446046 KRTAP2-1Q9BYU5 128 aa3.33□□□□□ -1.88
FN1-212ENST00000446046 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
FN1-212ENST00000446046 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
FN1-212ENST00000446046 RYR2Q92736 4967 aa3.3□□□□□ -1.88
FN1-212ENST00000446046 KRTAP4-3Q9BYR4 195 aa3.3□□□□□ -1.88
FN1-212ENST00000446046 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
FN1-212ENST00000446046 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
FN1-212ENST00000446046 KMT2CQ8NEZ4 4911 aaKnown RBP3.25□□□□□ -1.89
FN1-212ENST00000446046 HERC2O95714 4834 aa3.23□□□□□ -1.89
FN1-212ENST00000446046 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
FN1-212ENST00000446046 PCLOQ9Y6V0 5065 aa3.16□□□□□ -1.9
FN1-212ENST00000446046 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
FN1-212ENST00000446046 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
FN1-212ENST00000446046 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
FN1-212ENST00000446046 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
FN1-212ENST00000446046 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
FN1-212ENST00000446046 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
FN1-212ENST00000446046 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
FN1-212ENST00000446046 BIRC6Q9NR09 4857 aa3.06□□□□□ -1.92
FN1-212ENST00000446046 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
FN1-212ENST00000446046 KIAA1109Q2LD37 5005 aa3.05□□□□□ -1.92
FN1-212ENST00000446046 HERC1Q15751 4861 aa3.01□□□□□ -1.93
FN1-212ENST00000446046 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.95
FN1-212ENST00000446046 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
FN1-212ENST00000446046 KRTAP9-6A8MVA2 160 aa2.83□□□□□ -1.96
FN1-212ENST00000446046 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
FN1-212ENST00000446046 EPPK1P58107 5090 aaKnown RBP2.68□□□□□ -1.98
FN1-212ENST00000446046 FAT4Q6V0I7 4981 aa2.67□□□□□ -1.98
FN1-212ENST00000446046 ABCA13Q86UQ4 5058 aa2.66□□□□□ -1.98
FN1-212ENST00000446046 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
FN1-212ENST00000446046 MUC2Q02817 5179 aa2.63□□□□□ -1.99
FN1-212ENST00000446046 KRTAP4-6Q9BYQ5 205 aa2.61□□□□□ -1.99
FN1-212ENST00000446046 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
FN1-212ENST00000446046 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
FN1-212ENST00000446046 UBR4Q5T4S7 5183 aa2.5□□□□□ -2.01
FN1-212ENST00000446046 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
FN1-212ENST00000446046 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
FN1-212ENST00000446046 KMT2DO14686 5537 aa2.44□□□□□ -2.02
FN1-212ENST00000446046 NEBP20929 6669 aa2.44□□□□□ -2.02
FN1-212ENST00000446046 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
FN1-212ENST00000446046 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
FN1-212ENST00000446046 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
FN1-212ENST00000446046 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
FN1-212ENST00000446046 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
FN1-212ENST00000446046 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
FN1-212ENST00000446046 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
FN1-212ENST00000446046 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
FN1-212ENST00000446046 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
FN1-212ENST00000446046 MDN1Q9NU22 5596 aa2.08□□□□□ -2.08
FN1-212ENST00000446046 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
FN1-212ENST00000446046 USH2AO75445 5202 aa2□□□□□ -2.09
FN1-212ENST00000446046 MUC12Q9UKN1 5478 aa2□□□□□ -2.09
FN1-212ENST00000446046 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
FN1-212ENST00000446046 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
FN1-212ENST00000446046 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
FN1-212ENST00000446046 GPR98Q8WXG9 6306 aa1.92□□□□□ -2.1
FN1-212ENST00000446046 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
FN1-212ENST00000446046 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
FN1-212ENST00000446046 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
FN1-212ENST00000446046 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
FN1-212ENST00000446046 HMCN1Q96RW7 5635 aa1.66□□□□□ -2.14
FN1-212ENST00000446046 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
FN1-212ENST00000446046 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
FN1-212ENST00000446046 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
FN1-212ENST00000446046 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
FN1-212ENST00000446046 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
FN1-212ENST00000446046 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
FN1-212ENST00000446046 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
FN1-212ENST00000446046 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 7.7 ms