RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
GARNL3-208ENST00000444677 MT1LQ93083 61 aa4.84□□□□□ -1.63
GARNL3-208ENST00000444677 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.64
GARNL3-208ENST00000444677 MT1GP13640 62 aa4.83□□□□□ -1.64
GARNL3-208ENST00000444677 Q1T7F1 81 aa4.83□□□□□ -1.64
GARNL3-208ENST00000444677 V9GYY9 64 aa4.8□□□□□ -1.64
GARNL3-208ENST00000444677 MT1MQ8N339 61 aa4.79□□□□□ -1.64
GARNL3-208ENST00000444677 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
GARNL3-208ENST00000444677 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
GARNL3-208ENST00000444677 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
GARNL3-208ENST00000444677 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
GARNL3-208ENST00000444677 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
GARNL3-208ENST00000444677 K7ERS5 55 aa4.7□□□□□ -1.66
GARNL3-208ENST00000444677 PCP4P48539 62 aa4.7□□□□□ -1.66
GARNL3-208ENST00000444677 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
GARNL3-208ENST00000444677 A6NED7 52 aa4.67□□□□□ -1.66
GARNL3-208ENST00000444677 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
GARNL3-208ENST00000444677 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
GARNL3-208ENST00000444677 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
GARNL3-208ENST00000444677 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
GARNL3-208ENST00000444677 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
GARNL3-208ENST00000444677 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
GARNL3-208ENST00000444677 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
GARNL3-208ENST00000444677 MT4P47944 62 aa4.59□□□□□ -1.67
GARNL3-208ENST00000444677 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
GARNL3-208ENST00000444677 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
GARNL3-208ENST00000444677 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
GARNL3-208ENST00000444677 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
GARNL3-208ENST00000444677 ROMO1P60602 79 aa4.46□□□□□ -1.7
GARNL3-208ENST00000444677 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
GARNL3-208ENST00000444677 KRTAP5-5Q701N2 237 aaPredicted RBP4.37□□□□□ -1.71
GARNL3-208ENST00000444677 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
GARNL3-208ENST00000444677 AHNAK2Q8IVF2 5795 aa4.34□□□□□ -1.71
GARNL3-208ENST00000444677 KRTAP5-10Q6L8G5 202 aa4.31□□□□□ -1.72
GARNL3-208ENST00000444677 SYNE1Q8NF91 8797 aaKnown RBP4.28□□□□□ -1.72
GARNL3-208ENST00000444677 KRTAP20-2Q3LI61 65 aa4.24□□□□□ -1.73
GARNL3-208ENST00000444677 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
GARNL3-208ENST00000444677 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
GARNL3-208ENST00000444677 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
GARNL3-208ENST00000444677 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
GARNL3-208ENST00000444677 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
GARNL3-208ENST00000444677 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
GARNL3-208ENST00000444677 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
GARNL3-208ENST00000444677 MT1AP04731 61 aa4.1□□□□□ -1.75
GARNL3-208ENST00000444677 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
GARNL3-208ENST00000444677 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
GARNL3-208ENST00000444677 A0A0A0MQY5 61 aa4□□□□□ -1.77
GARNL3-208ENST00000444677 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
GARNL3-208ENST00000444677 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
GARNL3-208ENST00000444677 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
GARNL3-208ENST00000444677 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
GARNL3-208ENST00000444677 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
GARNL3-208ENST00000444677 MT3P25713 68 aa3.73□□□□□ -1.81
GARNL3-208ENST00000444677 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
GARNL3-208ENST00000444677 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
GARNL3-208ENST00000444677 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
GARNL3-208ENST00000444677 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
GARNL3-208ENST00000444677 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
GARNL3-208ENST00000444677 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
GARNL3-208ENST00000444677 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
GARNL3-208ENST00000444677 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
GARNL3-208ENST00000444677 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
GARNL3-208ENST00000444677 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
GARNL3-208ENST00000444677 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
GARNL3-208ENST00000444677 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
GARNL3-208ENST00000444677 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
GARNL3-208ENST00000444677 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
GARNL3-208ENST00000444677 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
GARNL3-208ENST00000444677 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
GARNL3-208ENST00000444677 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
GARNL3-208ENST00000444677 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
GARNL3-208ENST00000444677 PHGR1C9JFL3 82 aa2.54□□□□□ -2
GARNL3-208ENST00000444677 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
GARNL3-208ENST00000444677 PRM1P04553 51 aa2.31□□□□□ -2.04
GARNL3-208ENST00000444677 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
GARNL3-208ENST00000444677 INE1O15225 51 aa1.99□□□□□ -2.09
GARNL3-208ENST00000444677 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
GARNL3-208ENST00000444677 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 321.6 ms