RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 MT1MQ8N339 61 aa7.12□□□□□ -1.27
LRCH3-208ENST00000443727 UQCR11O14957 56 aa7.07□□□□□ -1.28
LRCH3-208ENST00000443727 GPR98Q8WXG9 6306 aa7□□□□□ -1.29
LRCH3-208ENST00000443727 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.3
LRCH3-208ENST00000443727 LCE1DQ5T752 114 aa6.95□□□□□ -1.3
LRCH3-208ENST00000443727 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
LRCH3-208ENST00000443727 KRTAP12-3P60328 96 aa6.92□□□□□ -1.3
LRCH3-208ENST00000443727 MT4P47944 62 aa6.91□□□□□ -1.3
LRCH3-208ENST00000443727 MIR22HGQ0VDD5 57 aa6.91□□□□□ -1.3
LRCH3-208ENST00000443727 K7ERS5 55 aa6.85□□□□□ -1.31
LRCH3-208ENST00000443727 HMCN1Q96RW7 5635 aa6.81□□□□□ -1.32
LRCH3-208ENST00000443727 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
LRCH3-208ENST00000443727 KRTAP4-7Q9BYR0 210 aa6.79□□□□□ -1.32
LRCH3-208ENST00000443727 V9GYY9 64 aa6.78□□□□□ -1.32
LRCH3-208ENST00000443727 PSPHP1O15172 72 aa6.77□□□□□ -1.33
LRCH3-208ENST00000443727 KRTAP5-4Q6L8H1 288 aa6.77□□□□□ -1.33
LRCH3-208ENST00000443727 Q1T7F1 81 aa6.69□□□□□ -1.34
LRCH3-208ENST00000443727 AHNAK2Q8IVF2 5795 aa6.59□□□□□ -1.36
LRCH3-208ENST00000443727 A6NED7 52 aa6.56□□□□□ -1.36
LRCH3-208ENST00000443727 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
LRCH3-208ENST00000443727 KRTAP19-4Q3LI73 84 aa6.5□□□□□ -1.37
LRCH3-208ENST00000443727 KRTAP5-5Q701N2 237 aaPredicted RBP6.49□□□□□ -1.37
LRCH3-208ENST00000443727 KRTAP15-1Q3LI76 137 aa6.45□□□□□ -1.38
LRCH3-208ENST00000443727 KRTAP5-10Q6L8G5 202 aa6.44□□□□□ -1.38
LRCH3-208ENST00000443727 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
LRCH3-208ENST00000443727 KRTAP12-4P60329 112 aa6.42□□□□□ -1.38
LRCH3-208ENST00000443727 KRTAP20-2Q3LI61 65 aa6.42□□□□□ -1.38
LRCH3-208ENST00000443727 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
LRCH3-208ENST00000443727 LCE3CQ5T5A8 94 aa6.36□□□□□ -1.39
LRCH3-208ENST00000443727 ROMO1P60602 79 aa6.32□□□□□ -1.4
LRCH3-208ENST00000443727 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
LRCH3-208ENST00000443727 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
LRCH3-208ENST00000443727 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
LRCH3-208ENST00000443727 KRTAP5-7Q6L8G8 165 aa6.2□□□□□ -1.42
LRCH3-208ENST00000443727 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
LRCH3-208ENST00000443727 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
LRCH3-208ENST00000443727 PCP4P48539 62 aa6.13□□□□□ -1.43
LRCH3-208ENST00000443727 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
LRCH3-208ENST00000443727 MT1AP04731 61 aa6.07□□□□□ -1.44
LRCH3-208ENST00000443727 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
LRCH3-208ENST00000443727 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.46
LRCH3-208ENST00000443727 KRTAP5-2Q701N4 177 aa5.92□□□□□ -1.46
LRCH3-208ENST00000443727 KRTAP4-11Q9BYQ6 195 aa5.87□□□□□ -1.47
LRCH3-208ENST00000443727 KRTAP6-2Q3LI66 62 aa5.79□□□□□ -1.48
LRCH3-208ENST00000443727 KRTAP4-2Q9BYR5 136 aa5.75□□□□□ -1.49
LRCH3-208ENST00000443727 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
LRCH3-208ENST00000443727 H3BS24 57 aa5.63□□□□□ -1.51
LRCH3-208ENST00000443727 MT3P25713 68 aa5.58□□□□□ -1.52
LRCH3-208ENST00000443727 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
LRCH3-208ENST00000443727 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
LRCH3-208ENST00000443727 AHNAKQ09666 5890 aaKnown RBP5.46□□□□□ -1.54
LRCH3-208ENST00000443727 MUC5ACP98088 5654 aa5.42□□□□□ -1.54
LRCH3-208ENST00000443727 MUC5BQ9HC84 5762 aaPredicted RBP5.41□□□□□ -1.54
LRCH3-208ENST00000443727 KRTAP5-1Q6L8H4 278 aa5.32□□□□□ -1.56
LRCH3-208ENST00000443727 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
LRCH3-208ENST00000443727 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
LRCH3-208ENST00000443727 PRAC1Q96KF2 57 aa5.03□□□□□ -1.6
LRCH3-208ENST00000443727 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
LRCH3-208ENST00000443727 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
LRCH3-208ENST00000443727 PRO0628Q9UI54 55 aa4.71□□□□□ -1.66
LRCH3-208ENST00000443727 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
LRCH3-208ENST00000443727 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
LRCH3-208ENST00000443727 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
LRCH3-208ENST00000443727 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
LRCH3-208ENST00000443727 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
LRCH3-208ENST00000443727 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
LRCH3-208ENST00000443727 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
LRCH3-208ENST00000443727 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
LRCH3-208ENST00000443727 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
LRCH3-208ENST00000443727 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
LRCH3-208ENST00000443727 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
LRCH3-208ENST00000443727 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
LRCH3-208ENST00000443727 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
LRCH3-208ENST00000443727 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
LRCH3-208ENST00000443727 PRM1P04553 51 aa3.22□□□□□ -1.89
LRCH3-208ENST00000443727 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
LRCH3-208ENST00000443727 INE1O15225 51 aa2.63□□□□□ -1.99
LRCH3-208ENST00000443727 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 86.4 ms