RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 SEC61GP60059 68 aa4.54□□□□□ -1.68
TNXB-202ENST00000442721 A0A1B0GU33 70 aa4.53□□□□□ -1.68
TNXB-202ENST00000442721 KRTAP19-7Q3SYF9 63 aa4.49□□□□□ -1.69
TNXB-202ENST00000442721 A0A0D9SG42 100 aa4.48□□□□□ -1.69
TNXB-202ENST00000442721 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
TNXB-202ENST00000442721 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
TNXB-202ENST00000442721 MT1EP04732 61 aa4.47□□□□□ -1.69
TNXB-202ENST00000442721 A8MU10 97 aa4.46□□□□□ -1.7
TNXB-202ENST00000442721 KRTAP12-1P59990 96 aa4.45□□□□□ -1.7
TNXB-202ENST00000442721 MT4P47944 62 aa4.44□□□□□ -1.7
TNXB-202ENST00000442721 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
TNXB-202ENST00000442721 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
TNXB-202ENST00000442721 Q1T7F1 81 aa4.4□□□□□ -1.71
TNXB-202ENST00000442721 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
TNXB-202ENST00000442721 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
TNXB-202ENST00000442721 PSPHP1O15172 72 aa4.38□□□□□ -1.71
TNXB-202ENST00000442721 RPS28P62857 69 aaKnown RBP4.37□□□□□ -1.71
TNXB-202ENST00000442721 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
TNXB-202ENST00000442721 MT1GP13640 62 aa4.33□□□□□ -1.72
TNXB-202ENST00000442721 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
TNXB-202ENST00000442721 V9GYY9 64 aa4.33□□□□□ -1.72
TNXB-202ENST00000442721 UQCR11O14957 56 aa4.32□□□□□ -1.72
TNXB-202ENST00000442721 MT3P25713 68 aa4.28□□□□□ -1.72
TNXB-202ENST00000442721 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
TNXB-202ENST00000442721 MIR22HGQ0VDD5 57 aa4.27□□□□□ -1.73
TNXB-202ENST00000442721 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
TNXB-202ENST00000442721 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
TNXB-202ENST00000442721 MT1MQ8N339 61 aa4.26□□□□□ -1.73
TNXB-202ENST00000442721 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
TNXB-202ENST00000442721 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
TNXB-202ENST00000442721 MT1LQ93083 61 aa4.21□□□□□ -1.74
TNXB-202ENST00000442721 A6NED7 52 aa4.19□□□□□ -1.74
TNXB-202ENST00000442721 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
TNXB-202ENST00000442721 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
TNXB-202ENST00000442721 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
TNXB-202ENST00000442721 CDC42SE1Q9NRR8 79 aa4.09□□□□□ -1.75
TNXB-202ENST00000442721 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
TNXB-202ENST00000442721 TNP1P09430 55 aa4.06□□□□□ -1.76
TNXB-202ENST00000442721 K7ERS5 55 aa4.03□□□□□ -1.76
TNXB-202ENST00000442721 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
TNXB-202ENST00000442721 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
TNXB-202ENST00000442721 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
TNXB-202ENST00000442721 ROMO1P60602 79 aa3.92□□□□□ -1.78
TNXB-202ENST00000442721 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
TNXB-202ENST00000442721 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
TNXB-202ENST00000442721 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
TNXB-202ENST00000442721 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
TNXB-202ENST00000442721 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
TNXB-202ENST00000442721 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
TNXB-202ENST00000442721 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
TNXB-202ENST00000442721 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
TNXB-202ENST00000442721 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
TNXB-202ENST00000442721 PMAIP1Q13794 54 aa3.63□□□□□ -1.83
TNXB-202ENST00000442721 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
TNXB-202ENST00000442721 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
TNXB-202ENST00000442721 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
TNXB-202ENST00000442721 MT1AP04731 61 aa3.57□□□□□ -1.84
TNXB-202ENST00000442721 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
TNXB-202ENST00000442721 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
TNXB-202ENST00000442721 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
TNXB-202ENST00000442721 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
TNXB-202ENST00000442721 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
TNXB-202ENST00000442721 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.87
TNXB-202ENST00000442721 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
TNXB-202ENST00000442721 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
TNXB-202ENST00000442721 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.18□□□□□ -1.9
TNXB-202ENST00000442721 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
TNXB-202ENST00000442721 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
TNXB-202ENST00000442721 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
TNXB-202ENST00000442721 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
TNXB-202ENST00000442721 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
TNXB-202ENST00000442721 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
TNXB-202ENST00000442721 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
TNXB-202ENST00000442721 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
TNXB-202ENST00000442721 PRM1P04553 51 aa2.06□□□□□ -2.08
TNXB-202ENST00000442721 INE1O15225 51 aa2.03□□□□□ -2.08
TNXB-202ENST00000442721 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
TNXB-202ENST00000442721 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 124.3 ms