RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 KRTAP20-2Q3LI61 65 aa6.92□□□□□ -1.3
TMEM50B-204ENST00000442441 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
TMEM50B-204ENST00000442441 SEC61GP60059 68 aa6.89□□□□□ -1.31
TMEM50B-204ENST00000442441 SERP1Q9Y6X1 66 aa6.89□□□□□ -1.31
TMEM50B-204ENST00000442441 SPRR5A0A1B0GTR4 108 aa6.88□□□□□ -1.31
TMEM50B-204ENST00000442441 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
TMEM50B-204ENST00000442441 A0A1B0GU33 70 aa6.83□□□□□ -1.32
TMEM50B-204ENST00000442441 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
TMEM50B-204ENST00000442441 COA5Q86WW8 74 aa6.78□□□□□ -1.32
TMEM50B-204ENST00000442441 TNP1P09430 55 aa6.76□□□□□ -1.33
TMEM50B-204ENST00000442441 KRTAP5-5Q701N2 237 aaPredicted RBP6.76□□□□□ -1.33
TMEM50B-204ENST00000442441 COX7CP15954 63 aa6.75□□□□□ -1.33
TMEM50B-204ENST00000442441 KRTAP12-4P60329 112 aa6.73□□□□□ -1.33
TMEM50B-204ENST00000442441 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
TMEM50B-204ENST00000442441 SMIM26A0A096LP01 95 aa6.63□□□□□ -1.35
TMEM50B-204ENST00000442441 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
TMEM50B-204ENST00000442441 H7BZZ5 65 aa6.6□□□□□ -1.35
TMEM50B-204ENST00000442441 ANAPC13Q9BS18 74 aa6.6□□□□□ -1.35
TMEM50B-204ENST00000442441 A8MU10 97 aa6.59□□□□□ -1.35
TMEM50B-204ENST00000442441 SYNE1Q8NF91 8797 aaKnown RBP6.58□□□□□ -1.36
TMEM50B-204ENST00000442441 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
TMEM50B-204ENST00000442441 SVIPQ8NHG7 77 aa6.49□□□□□ -1.37
TMEM50B-204ENST00000442441 A0A1B0GU69 56 aa6.45□□□□□ -1.38
TMEM50B-204ENST00000442441 CCDC179H3BU77 68 aa6.44□□□□□ -1.38
TMEM50B-204ENST00000442441 AHNAKQ09666 5890 aaKnown RBP6.35□□□□□ -1.39
TMEM50B-204ENST00000442441 ATP5EP56381 51 aaPredicted RBP6.34□□□□□ -1.39
TMEM50B-204ENST00000442441 MUC5ACP98088 5654 aa6.31□□□□□ -1.4
TMEM50B-204ENST00000442441 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
TMEM50B-204ENST00000442441 KRTAP5-2Q701N4 177 aa6.29□□□□□ -1.4
TMEM50B-204ENST00000442441 MUC5BQ9HC84 5762 aaPredicted RBP6.27□□□□□ -1.4
TMEM50B-204ENST00000442441 KRTAP5-8O75690 187 aa6.24□□□□□ -1.41
TMEM50B-204ENST00000442441 TMEM258P61165 79 aa6.22□□□□□ -1.41
TMEM50B-204ENST00000442441 PRR15LQ9BU68 103 aa6.18□□□□□ -1.42
TMEM50B-204ENST00000442441 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
TMEM50B-204ENST00000442441 LINC01558Q9Y6Z2 57 aa6.13□□□□□ -1.43
TMEM50B-204ENST00000442441 MT1AP04731 61 aa6.12□□□□□ -1.43
TMEM50B-204ENST00000442441 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
TMEM50B-204ENST00000442441 OBSCNQ5VST9 7968 aa6.1□□□□□ -1.43
TMEM50B-204ENST00000442441 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
TMEM50B-204ENST00000442441 UQCR11O14957 56 aa5.98□□□□□ -1.45
TMEM50B-204ENST00000442441 KRTAP6-2Q3LI66 62 aa5.97□□□□□ -1.45
TMEM50B-204ENST00000442441 V9GYY9 64 aa5.89□□□□□ -1.47
TMEM50B-204ENST00000442441 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
TMEM50B-204ENST00000442441 Q1T7F1 81 aa5.84□□□□□ -1.47
TMEM50B-204ENST00000442441 PSPHP1O15172 72 aa5.81□□□□□ -1.48
TMEM50B-204ENST00000442441 PCP4P48539 62 aa5.8□□□□□ -1.48
TMEM50B-204ENST00000442441 KRTAP5-1Q6L8H4 278 aa5.75□□□□□ -1.49
TMEM50B-204ENST00000442441 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
TMEM50B-204ENST00000442441 K7ERS5 55 aa5.74□□□□□ -1.49
TMEM50B-204ENST00000442441 RPS28P62857 69 aaKnown RBP5.67□□□□□ -1.5
TMEM50B-204ENST00000442441 A6NED7 52 aa5.64□□□□□ -1.51
TMEM50B-204ENST00000442441 MT3P25713 68 aa5.63□□□□□ -1.51
TMEM50B-204ENST00000442441 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
TMEM50B-204ENST00000442441 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
TMEM50B-204ENST00000442441 ROMO1P60602 79 aa5.34□□□□□ -1.55
TMEM50B-204ENST00000442441 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
TMEM50B-204ENST00000442441 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
TMEM50B-204ENST00000442441 BRK1Q8WUW1 75 aa5□□□□□ -1.61
TMEM50B-204ENST00000442441 LCE1CQ5T751 118 aa4.92□□□□□ -1.62
TMEM50B-204ENST00000442441 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
TMEM50B-204ENST00000442441 KRTAP5-11Q6L8G4 156 aa4.55□□□□□ -1.68
TMEM50B-204ENST00000442441 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
TMEM50B-204ENST00000442441 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
TMEM50B-204ENST00000442441 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
TMEM50B-204ENST00000442441 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
TMEM50B-204ENST00000442441 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
TMEM50B-204ENST00000442441 PHGR1C9JFL3 82 aa4.34□□□□□ -1.71
TMEM50B-204ENST00000442441 LCE3DQ9BYE3 92 aa4.26□□□□□ -1.73
TMEM50B-204ENST00000442441 KTN1-AS1Q86SY8 53 aa4.24□□□□□ -1.73
TMEM50B-204ENST00000442441 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
TMEM50B-204ENST00000442441 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
TMEM50B-204ENST00000442441 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
TMEM50B-204ENST00000442441 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
TMEM50B-204ENST00000442441 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
TMEM50B-204ENST00000442441 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
TMEM50B-204ENST00000442441 PRM1P04553 51 aa2.73□□□□□ -1.97
TMEM50B-204ENST00000442441 INE1O15225 51 aa2.57□□□□□ -2
TMEM50B-204ENST00000442441 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 91.1 ms