RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
HMGB3P22-201ENST00000442010 LCE1DQ5T752 114 aa6.56□□□□□ -1.36
HMGB3P22-201ENST00000442010 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
HMGB3P22-201ENST00000442010 GPR98Q8WXG9 6306 aa6.53□□□□□ -1.36
HMGB3P22-201ENST00000442010 UQCR11O14957 56 aa6.52□□□□□ -1.37
HMGB3P22-201ENST00000442010 KRTAP5-4Q6L8H1 288 aa6.47□□□□□ -1.37
HMGB3P22-201ENST00000442010 MT4P47944 62 aa6.46□□□□□ -1.38
HMGB3P22-201ENST00000442010 KRTAP12-3P60328 96 aa6.46□□□□□ -1.38
HMGB3P22-201ENST00000442010 HMCN1Q96RW7 5635 aa6.42□□□□□ -1.38
HMGB3P22-201ENST00000442010 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
HMGB3P22-201ENST00000442010 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
HMGB3P22-201ENST00000442010 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
HMGB3P22-201ENST00000442010 KRTAP25-1Q3LHN0 102 aa6.32□□□□□ -1.4
HMGB3P22-201ENST00000442010 PSPHP1O15172 72 aa6.21□□□□□ -1.42
HMGB3P22-201ENST00000442010 Q1T7F1 81 aa6.21□□□□□ -1.42
HMGB3P22-201ENST00000442010 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P22-201ENST00000442010 V9GYY9 64 aa6.21□□□□□ -1.42
HMGB3P22-201ENST00000442010 K7ERS5 55 aa6.2□□□□□ -1.42
HMGB3P22-201ENST00000442010 AHNAK2Q8IVF2 5795 aa6.2□□□□□ -1.42
HMGB3P22-201ENST00000442010 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
HMGB3P22-201ENST00000442010 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
HMGB3P22-201ENST00000442010 KRTAP5-10Q6L8G5 202 aa6.14□□□□□ -1.43
HMGB3P22-201ENST00000442010 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
HMGB3P22-201ENST00000442010 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
HMGB3P22-201ENST00000442010 KRTAP20-2Q3LI61 65 aa6.08□□□□□ -1.44
HMGB3P22-201ENST00000442010 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
HMGB3P22-201ENST00000442010 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
HMGB3P22-201ENST00000442010 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
HMGB3P22-201ENST00000442010 A6NED7 52 aa5.98□□□□□ -1.45
HMGB3P22-201ENST00000442010 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
HMGB3P22-201ENST00000442010 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
HMGB3P22-201ENST00000442010 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
HMGB3P22-201ENST00000442010 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
HMGB3P22-201ENST00000442010 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
HMGB3P22-201ENST00000442010 ROMO1P60602 79 aa5.83□□□□□ -1.48
HMGB3P22-201ENST00000442010 RPS28P62857 69 aaKnown RBP5.82□□□□□ -1.48
HMGB3P22-201ENST00000442010 MT1AP04731 61 aa5.73□□□□□ -1.49
HMGB3P22-201ENST00000442010 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
HMGB3P22-201ENST00000442010 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
HMGB3P22-201ENST00000442010 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
HMGB3P22-201ENST00000442010 PCP4P48539 62 aa5.62□□□□□ -1.51
HMGB3P22-201ENST00000442010 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
HMGB3P22-201ENST00000442010 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
HMGB3P22-201ENST00000442010 H3BS24 57 aa5.48□□□□□ -1.53
HMGB3P22-201ENST00000442010 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
HMGB3P22-201ENST00000442010 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
HMGB3P22-201ENST00000442010 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
HMGB3P22-201ENST00000442010 MT3P25713 68 aa5.22□□□□□ -1.57
HMGB3P22-201ENST00000442010 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P22-201ENST00000442010 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
HMGB3P22-201ENST00000442010 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
HMGB3P22-201ENST00000442010 AHNAKQ09666 5890 aaKnown RBP5.05□□□□□ -1.6
HMGB3P22-201ENST00000442010 BRK1Q8WUW1 75 aa5.03□□□□□ -1.6
HMGB3P22-201ENST00000442010 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
HMGB3P22-201ENST00000442010 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
HMGB3P22-201ENST00000442010 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
HMGB3P22-201ENST00000442010 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
HMGB3P22-201ENST00000442010 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
HMGB3P22-201ENST00000442010 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
HMGB3P22-201ENST00000442010 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
HMGB3P22-201ENST00000442010 KTN1-AS1Q86SY8 53 aa4.13□□□□□ -1.75
HMGB3P22-201ENST00000442010 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P22-201ENST00000442010 SVIPQ8NHG7 77 aa4.09□□□□□ -1.75
HMGB3P22-201ENST00000442010 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
HMGB3P22-201ENST00000442010 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
HMGB3P22-201ENST00000442010 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
HMGB3P22-201ENST00000442010 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
HMGB3P22-201ENST00000442010 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
HMGB3P22-201ENST00000442010 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
HMGB3P22-201ENST00000442010 PHGR1C9JFL3 82 aa3.54□□□□□ -1.84
HMGB3P22-201ENST00000442010 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
HMGB3P22-201ENST00000442010 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
HMGB3P22-201ENST00000442010 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
HMGB3P22-201ENST00000442010 PRM1P04553 51 aa2.98□□□□□ -1.93
HMGB3P22-201ENST00000442010 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
HMGB3P22-201ENST00000442010 INE1O15225 51 aa2.65□□□□□ -1.99
HMGB3P22-201ENST00000442010 MUC16Q8WXI7 14507 aa2.3□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 92.3 ms