RNA–Protein interactions for RNA: ENST00000440179.5

SMC2-204, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 3

Gene SMC2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-204ENST00000440179 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
SMC2-204ENST00000440179 SPTSSBQ8NFR3 76 aa4.78□□□□□ -1.64
SMC2-204ENST00000440179 MT1LQ93083 61 aa4.77□□□□□ -1.65
SMC2-204ENST00000440179 CHKB-CPT1BH3BT56 60 aa4.76□□□□□ -1.65
SMC2-204ENST00000440179 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
SMC2-204ENST00000440179 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
SMC2-204ENST00000440179 SNURFQ9Y675 71 aa4.74□□□□□ -1.65
SMC2-204ENST00000440179 A0A0D9SG42 100 aa4.7□□□□□ -1.66
SMC2-204ENST00000440179 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
SMC2-204ENST00000440179 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
SMC2-204ENST00000440179 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
SMC2-204ENST00000440179 SERP2Q8N6R1 65 aa4.66□□□□□ -1.66
SMC2-204ENST00000440179 AHNAKQ09666 5890 aaKnown RBP4.64□□□□□ -1.67
SMC2-204ENST00000440179 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
SMC2-204ENST00000440179 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
SMC2-204ENST00000440179 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
SMC2-204ENST00000440179 COA5Q86WW8 74 aa4.56□□□□□ -1.68
SMC2-204ENST00000440179 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
SMC2-204ENST00000440179 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
SMC2-204ENST00000440179 SEC61GP60059 68 aa4.51□□□□□ -1.69
SMC2-204ENST00000440179 KRTAP12-4P60329 112 aa4.51□□□□□ -1.69
SMC2-204ENST00000440179 COX7CP15954 63 aa4.5□□□□□ -1.69
SMC2-204ENST00000440179 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
SMC2-204ENST00000440179 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
SMC2-204ENST00000440179 SERP1Q9Y6X1 66 aa4.49□□□□□ -1.69
SMC2-204ENST00000440179 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
SMC2-204ENST00000440179 H7BZZ5 65 aa4.44□□□□□ -1.7
SMC2-204ENST00000440179 A0A1B0GU33 70 aa4.41□□□□□ -1.7
SMC2-204ENST00000440179 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
SMC2-204ENST00000440179 KRTAP4-4Q9BYR3 166 aa4.41□□□□□ -1.7
SMC2-204ENST00000440179 SPINT4Q6UDR6 99 aa4.38□□□□□ -1.71
SMC2-204ENST00000440179 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
SMC2-204ENST00000440179 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
SMC2-204ENST00000440179 ANAPC13Q9BS18 74 aa4.34□□□□□ -1.71
SMC2-204ENST00000440179 A0A1B0GU69 56 aa4.33□□□□□ -1.72
SMC2-204ENST00000440179 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
SMC2-204ENST00000440179 SMIM26A0A096LP01 95 aa4.29□□□□□ -1.72
SMC2-204ENST00000440179 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
SMC2-204ENST00000440179 A8MU10 97 aa4.25□□□□□ -1.73
SMC2-204ENST00000440179 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
SMC2-204ENST00000440179 PRAC1Q96KF2 57 aa4.25□□□□□ -1.73
SMC2-204ENST00000440179 CCDC179H3BU77 68 aa4.24□□□□□ -1.73
SMC2-204ENST00000440179 TNP1P09430 55 aa4.22□□□□□ -1.73
SMC2-204ENST00000440179 ATP5EP56381 51 aaPredicted RBP4.22□□□□□ -1.73
SMC2-204ENST00000440179 PRR15LQ9BU68 103 aa4.21□□□□□ -1.74
SMC2-204ENST00000440179 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
SMC2-204ENST00000440179 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
SMC2-204ENST00000440179 LINC01558Q9Y6Z2 57 aa4.13□□□□□ -1.75
SMC2-204ENST00000440179 TMEM258P61165 79 aa4.09□□□□□ -1.75
SMC2-204ENST00000440179 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
SMC2-204ENST00000440179 UQCR11O14957 56 aa4.05□□□□□ -1.76
SMC2-204ENST00000440179 MT1AP04731 61 aa4.04□□□□□ -1.76
SMC2-204ENST00000440179 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
SMC2-204ENST00000440179 MIR22HGQ0VDD5 57 aa3.96□□□□□ -1.78
SMC2-204ENST00000440179 K7ERS5 55 aa3.91□□□□□ -1.78
SMC2-204ENST00000440179 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
SMC2-204ENST00000440179 V9GYY9 64 aa3.89□□□□□ -1.79
SMC2-204ENST00000440179 PSPHP1O15172 72 aa3.88□□□□□ -1.79
SMC2-204ENST00000440179 Q1T7F1 81 aa3.84□□□□□ -1.79
SMC2-204ENST00000440179 A6NED7 52 aa3.76□□□□□ -1.81
SMC2-204ENST00000440179 CDC42SE1Q9NRR8 79 aa3.69□□□□□ -1.82
SMC2-204ENST00000440179 ROMO1P60602 79 aa3.62□□□□□ -1.83
SMC2-204ENST00000440179 RPS28P62857 69 aaKnown RBP3.61□□□□□ -1.83
SMC2-204ENST00000440179 LCE1CQ5T751 118 aa3.47□□□□□ -1.85
SMC2-204ENST00000440179 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
SMC2-204ENST00000440179 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
SMC2-204ENST00000440179 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
SMC2-204ENST00000440179 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
SMC2-204ENST00000440179 PMAIP1Q13794 54 aa2.99□□□□□ -1.93
SMC2-204ENST00000440179 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
SMC2-204ENST00000440179 PRO0628Q9UI54 55 aa2.71□□□□□ -1.98
SMC2-204ENST00000440179 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
SMC2-204ENST00000440179 KTN1-AS1Q86SY8 53 aa2.61□□□□□ -1.99
SMC2-204ENST00000440179 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
SMC2-204ENST00000440179 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SMC2-204ENST00000440179 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
SMC2-204ENST00000440179 PRM1P04553 51 aa1.85□□□□□ -2.11
SMC2-204ENST00000440179 INE1O15225 51 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 98.8 ms