RNA–Protein interactions for RNA: ENST00000438097.6

UBE3A-204, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 8,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-204ENST00000438097 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
UBE3A-204ENST00000438097 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
UBE3A-204ENST00000438097 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
UBE3A-204ENST00000438097 LPAP08519 4548 aa3.85□□□□□ -1.79
UBE3A-204ENST00000438097 RYR3Q15413 4870 aa3.78□□□□□ -1.8
UBE3A-204ENST00000438097 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
UBE3A-204ENST00000438097 KRTAP19-2Q3LHN2 52 aa3.77□□□□□ -1.81
UBE3A-204ENST00000438097 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
UBE3A-204ENST00000438097 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
UBE3A-204ENST00000438097 RYR1P21817 5038 aa3.74□□□□□ -1.81
UBE3A-204ENST00000438097 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
UBE3A-204ENST00000438097 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
UBE3A-204ENST00000438097 LRP2P98164 4655 aa3.7□□□□□ -1.82
UBE3A-204ENST00000438097 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
UBE3A-204ENST00000438097 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
UBE3A-204ENST00000438097 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
UBE3A-204ENST00000438097 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
UBE3A-204ENST00000438097 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
UBE3A-204ENST00000438097 LCE2AQ5TA79 106 aaPredicted RBP3.57□□□□□ -1.84
UBE3A-204ENST00000438097 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
UBE3A-204ENST00000438097 PCLOQ9Y6V0 5065 aa3.52□□□□□ -1.85
UBE3A-204ENST00000438097 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.52□□□□□ -1.85
UBE3A-204ENST00000438097 KMT2CQ8NEZ4 4911 aaKnown RBP3.51□□□□□ -1.85
UBE3A-204ENST00000438097 HERC2O95714 4834 aa3.44□□□□□ -1.86
UBE3A-204ENST00000438097 BIRC6Q9NR09 4857 aa3.43□□□□□ -1.86
UBE3A-204ENST00000438097 RYR2Q92736 4967 aa3.3□□□□□ -1.88
UBE3A-204ENST00000438097 HERC1Q15751 4861 aa3.24□□□□□ -1.89
UBE3A-204ENST00000438097 HYDINQ4G0P3 5121 aa3.21□□□□□ -1.89
UBE3A-204ENST00000438097 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
UBE3A-204ENST00000438097 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
UBE3A-204ENST00000438097 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
UBE3A-204ENST00000438097 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
UBE3A-204ENST00000438097 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
UBE3A-204ENST00000438097 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
UBE3A-204ENST00000438097 KRTAP5-9P26371 169 aa2.99□□□□□ -1.93
UBE3A-204ENST00000438097 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
UBE3A-204ENST00000438097 KRTAP4-6Q9BYQ5 205 aa2.87□□□□□ -1.95
UBE3A-204ENST00000438097 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
UBE3A-204ENST00000438097 EPPK1P58107 5090 aaKnown RBP2.84□□□□□ -1.95
UBE3A-204ENST00000438097 KIAA1109Q2LD37 5005 aa2.83□□□□□ -1.96
UBE3A-204ENST00000438097 MUC2Q02817 5179 aa2.78□□□□□ -1.96
UBE3A-204ENST00000438097 NEBP20929 6669 aa2.77□□□□□ -1.97
UBE3A-204ENST00000438097 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
UBE3A-204ENST00000438097 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
UBE3A-204ENST00000438097 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
UBE3A-204ENST00000438097 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
UBE3A-204ENST00000438097 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
UBE3A-204ENST00000438097 UBR4Q5T4S7 5183 aa2.52□□□□□ -2.01
UBE3A-204ENST00000438097 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
UBE3A-204ENST00000438097 DSTQ03001 7570 aaKnown RBP2.47□□□□□ -2.01
UBE3A-204ENST00000438097 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
UBE3A-204ENST00000438097 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
UBE3A-204ENST00000438097 KMT2DO14686 5537 aa2.42□□□□□ -2.02
UBE3A-204ENST00000438097 MDN1Q9NU22 5596 aa2.41□□□□□ -2.02
UBE3A-204ENST00000438097 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
UBE3A-204ENST00000438097 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
UBE3A-204ENST00000438097 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
UBE3A-204ENST00000438097 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
UBE3A-204ENST00000438097 USH2AO75445 5202 aa2.22□□□□□ -2.05
UBE3A-204ENST00000438097 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
UBE3A-204ENST00000438097 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
UBE3A-204ENST00000438097 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
UBE3A-204ENST00000438097 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
UBE3A-204ENST00000438097 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
UBE3A-204ENST00000438097 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
UBE3A-204ENST00000438097 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
UBE3A-204ENST00000438097 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
UBE3A-204ENST00000438097 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
UBE3A-204ENST00000438097 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
UBE3A-204ENST00000438097 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
UBE3A-204ENST00000438097 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
UBE3A-204ENST00000438097 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
UBE3A-204ENST00000438097 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
UBE3A-204ENST00000438097 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
UBE3A-204ENST00000438097 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
UBE3A-204ENST00000438097 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
UBE3A-204ENST00000438097 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 24.5 ms