RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 COA5Q86WW8 74 aa5.21□□□□□ -1.58
TNFRSF1A-203ENST00000437813 SERP1Q9Y6X1 66 aa5.2□□□□□ -1.58
TNFRSF1A-203ENST00000437813 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
TNFRSF1A-203ENST00000437813 SPATA8Q6RVD6 105 aa5.18□□□□□ -1.58
TNFRSF1A-203ENST00000437813 MT1MQ8N339 61 aa5.15□□□□□ -1.59
TNFRSF1A-203ENST00000437813 MT1LQ93083 61 aa5.13□□□□□ -1.59
TNFRSF1A-203ENST00000437813 HMCN1Q96RW7 5635 aa5.11□□□□□ -1.59
TNFRSF1A-203ENST00000437813 A0A1B0GU33 70 aa5.11□□□□□ -1.59
TNFRSF1A-203ENST00000437813 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
TNFRSF1A-203ENST00000437813 SPINT4Q6UDR6 99 aa5.1□□□□□ -1.59
TNFRSF1A-203ENST00000437813 SMIM26A0A096LP01 95 aa5.09□□□□□ -1.59
TNFRSF1A-203ENST00000437813 SEC61GP60059 68 aa5.08□□□□□ -1.6
TNFRSF1A-203ENST00000437813 KRTAP5-4Q6L8H1 288 aa5.08□□□□□ -1.6
TNFRSF1A-203ENST00000437813 MT4P47944 62 aa5.05□□□□□ -1.6
TNFRSF1A-203ENST00000437813 KRTAP4-3Q9BYR4 195 aa5.04□□□□□ -1.6
TNFRSF1A-203ENST00000437813 LCE3AQ5TA76 89 aa5.01□□□□□ -1.61
TNFRSF1A-203ENST00000437813 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
TNFRSF1A-203ENST00000437813 V9GYY9 64 aa4.98□□□□□ -1.61
TNFRSF1A-203ENST00000437813 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
TNFRSF1A-203ENST00000437813 Q1T7F1 81 aa4.97□□□□□ -1.61
TNFRSF1A-203ENST00000437813 A8MU10 97 aa4.96□□□□□ -1.62
TNFRSF1A-203ENST00000437813 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
TNFRSF1A-203ENST00000437813 TNP1P09430 55 aa4.9□□□□□ -1.63
TNFRSF1A-203ENST00000437813 A0A1B0GU69 56 aa4.89□□□□□ -1.63
TNFRSF1A-203ENST00000437813 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
TNFRSF1A-203ENST00000437813 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
TNFRSF1A-203ENST00000437813 KRTAP5-5Q701N2 237 aaPredicted RBP4.8□□□□□ -1.64
TNFRSF1A-203ENST00000437813 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
TNFRSF1A-203ENST00000437813 PRR15LQ9BU68 103 aa4.78□□□□□ -1.64
TNFRSF1A-203ENST00000437813 PSPHP1O15172 72 aa4.77□□□□□ -1.65
TNFRSF1A-203ENST00000437813 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
TNFRSF1A-203ENST00000437813 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
TNFRSF1A-203ENST00000437813 PRO0628Q9UI54 55 aa4.7□□□□□ -1.66
TNFRSF1A-203ENST00000437813 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
TNFRSF1A-203ENST00000437813 A6NED7 52 aa4.66□□□□□ -1.66
TNFRSF1A-203ENST00000437813 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
TNFRSF1A-203ENST00000437813 UQCR11O14957 56 aa4.63□□□□□ -1.67
TNFRSF1A-203ENST00000437813 KRTAP12-4P60329 112 aa4.59□□□□□ -1.67
TNFRSF1A-203ENST00000437813 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
TNFRSF1A-203ENST00000437813 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
TNFRSF1A-203ENST00000437813 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
TNFRSF1A-203ENST00000437813 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
TNFRSF1A-203ENST00000437813 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
TNFRSF1A-203ENST00000437813 MT3P25713 68 aa4.43□□□□□ -1.7
TNFRSF1A-203ENST00000437813 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
TNFRSF1A-203ENST00000437813 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
TNFRSF1A-203ENST00000437813 K7ERS5 55 aa4.38□□□□□ -1.71
TNFRSF1A-203ENST00000437813 MT1AP04731 61 aa4.36□□□□□ -1.71
TNFRSF1A-203ENST00000437813 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
TNFRSF1A-203ENST00000437813 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
TNFRSF1A-203ENST00000437813 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
TNFRSF1A-203ENST00000437813 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
TNFRSF1A-203ENST00000437813 ROMO1P60602 79 aa4.19□□□□□ -1.74
TNFRSF1A-203ENST00000437813 KRTAP6-2Q3LI66 62 aa4.17□□□□□ -1.74
TNFRSF1A-203ENST00000437813 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
TNFRSF1A-203ENST00000437813 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
TNFRSF1A-203ENST00000437813 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
TNFRSF1A-203ENST00000437813 AHNAKQ09666 5890 aaKnown RBP4.12□□□□□ -1.75
TNFRSF1A-203ENST00000437813 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
TNFRSF1A-203ENST00000437813 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
TNFRSF1A-203ENST00000437813 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
TNFRSF1A-203ENST00000437813 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
TNFRSF1A-203ENST00000437813 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
TNFRSF1A-203ENST00000437813 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
TNFRSF1A-203ENST00000437813 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
TNFRSF1A-203ENST00000437813 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
TNFRSF1A-203ENST00000437813 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
TNFRSF1A-203ENST00000437813 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
TNFRSF1A-203ENST00000437813 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
TNFRSF1A-203ENST00000437813 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
TNFRSF1A-203ENST00000437813 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
TNFRSF1A-203ENST00000437813 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
TNFRSF1A-203ENST00000437813 INE1O15225 51 aa2.86□□□□□ -1.95
TNFRSF1A-203ENST00000437813 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
TNFRSF1A-203ENST00000437813 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
TNFRSF1A-203ENST00000437813 PRM1P04553 51 aa2.15□□□□□ -2.07
TNFRSF1A-203ENST00000437813 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
TNFRSF1A-203ENST00000437813 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 119.4 ms