RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
SBDSP1-203ENST00000437201 MT1LQ93083 61 aa6.23□□□□□ -1.41
SBDSP1-203ENST00000437201 MT1MQ8N339 61 aa6.22□□□□□ -1.41
SBDSP1-203ENST00000437201 C10orf95Q9H7T3 257 aa6.22□□□□□ -1.41
SBDSP1-203ENST00000437201 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
SBDSP1-203ENST00000437201 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
SBDSP1-203ENST00000437201 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
SBDSP1-203ENST00000437201 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
SBDSP1-203ENST00000437201 UQCR11O14957 56 aa6.08□□□□□ -1.44
SBDSP1-203ENST00000437201 GPR98Q8WXG9 6306 aa6.08□□□□□ -1.44
SBDSP1-203ENST00000437201 MT4P47944 62 aa6.05□□□□□ -1.44
SBDSP1-203ENST00000437201 TMEM258P61165 79 aa6.04□□□□□ -1.44
SBDSP1-203ENST00000437201 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
SBDSP1-203ENST00000437201 KRTAP12-3P60328 96 aa6.01□□□□□ -1.45
SBDSP1-203ENST00000437201 HMCN1Q96RW7 5635 aa5.99□□□□□ -1.45
SBDSP1-203ENST00000437201 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
SBDSP1-203ENST00000437201 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
SBDSP1-203ENST00000437201 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
SBDSP1-203ENST00000437201 K7ERS5 55 aa5.9□□□□□ -1.46
SBDSP1-203ENST00000437201 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.46
SBDSP1-203ENST00000437201 V9GYY9 64 aa5.8□□□□□ -1.48
SBDSP1-203ENST00000437201 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
SBDSP1-203ENST00000437201 AHNAK2Q8IVF2 5795 aa5.74□□□□□ -1.49
SBDSP1-203ENST00000437201 KRTAP5-10Q6L8G5 202 aa5.73□□□□□ -1.49
SBDSP1-203ENST00000437201 PSPHP1O15172 72 aa5.71□□□□□ -1.5
SBDSP1-203ENST00000437201 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
SBDSP1-203ENST00000437201 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
SBDSP1-203ENST00000437201 Q1T7F1 81 aa5.69□□□□□ -1.5
SBDSP1-203ENST00000437201 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
SBDSP1-203ENST00000437201 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
SBDSP1-203ENST00000437201 KRTAP20-2Q3LI61 65 aa5.65□□□□□ -1.5
SBDSP1-203ENST00000437201 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
SBDSP1-203ENST00000437201 PCP4P48539 62 aa5.59□□□□□ -1.51
SBDSP1-203ENST00000437201 A6NED7 52 aa5.56□□□□□ -1.52
SBDSP1-203ENST00000437201 SVIPQ8NHG7 77 aa5.56□□□□□ -1.52
SBDSP1-203ENST00000437201 KRTAP5-7Q6L8G8 165 aa5.54□□□□□ -1.52
SBDSP1-203ENST00000437201 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
SBDSP1-203ENST00000437201 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
SBDSP1-203ENST00000437201 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
SBDSP1-203ENST00000437201 ROMO1P60602 79 aa5.41□□□□□ -1.54
SBDSP1-203ENST00000437201 SYNE1Q8NF91 8797 aaKnown RBP5.38□□□□□ -1.55
SBDSP1-203ENST00000437201 MT1AP04731 61 aa5.31□□□□□ -1.56
SBDSP1-203ENST00000437201 KRTAP6-1Q3LI64 71 aa5.25□□□□□ -1.57
SBDSP1-203ENST00000437201 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
SBDSP1-203ENST00000437201 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
SBDSP1-203ENST00000437201 H3BS24 57 aa5.13□□□□□ -1.59
SBDSP1-203ENST00000437201 KRTAP6-2Q3LI66 62 aa5.05□□□□□ -1.6
SBDSP1-203ENST00000437201 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
SBDSP1-203ENST00000437201 MT3P25713 68 aa4.9□□□□□ -1.63
SBDSP1-203ENST00000437201 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
SBDSP1-203ENST00000437201 MUC5BQ9HC84 5762 aaPredicted RBP4.76□□□□□ -1.65
SBDSP1-203ENST00000437201 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
SBDSP1-203ENST00000437201 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
SBDSP1-203ENST00000437201 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
SBDSP1-203ENST00000437201 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
SBDSP1-203ENST00000437201 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
SBDSP1-203ENST00000437201 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
SBDSP1-203ENST00000437201 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
SBDSP1-203ENST00000437201 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
SBDSP1-203ENST00000437201 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
SBDSP1-203ENST00000437201 PRAC1Q96KF2 57 aa4.36□□□□□ -1.71
SBDSP1-203ENST00000437201 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
SBDSP1-203ENST00000437201 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
SBDSP1-203ENST00000437201 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
SBDSP1-203ENST00000437201 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
SBDSP1-203ENST00000437201 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
SBDSP1-203ENST00000437201 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
SBDSP1-203ENST00000437201 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
SBDSP1-203ENST00000437201 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
SBDSP1-203ENST00000437201 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
SBDSP1-203ENST00000437201 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
SBDSP1-203ENST00000437201 PHGR1C9JFL3 82 aa3.36□□□□□ -1.87
SBDSP1-203ENST00000437201 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
SBDSP1-203ENST00000437201 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
SBDSP1-203ENST00000437201 INE1O15225 51 aa2.82□□□□□ -1.96
SBDSP1-203ENST00000437201 PRM1P04553 51 aa2.73□□□□□ -1.97
SBDSP1-203ENST00000437201 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
SBDSP1-203ENST00000437201 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 86 ms