RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 MT1FP04733 61 aa2.85□□□□□ -1.95
ECHDC1-208ENST00000436638 C10orf95Q9H7T3 257 aa2.84□□□□□ -1.95
ECHDC1-208ENST00000436638 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
ECHDC1-208ENST00000436638 M0QZ58 72 aa2.74□□□□□ -1.97
ECHDC1-208ENST00000436638 SPRR2GQ9BYE4 73 aa2.73□□□□□ -1.97
ECHDC1-208ENST00000436638 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
ECHDC1-208ENST00000436638 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
ECHDC1-208ENST00000436638 CRCT1Q9UGL9 99 aa2.71□□□□□ -1.98
ECHDC1-208ENST00000436638 KRTAP19-8Q3LI54 63 aa2.7□□□□□ -1.98
ECHDC1-208ENST00000436638 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
ECHDC1-208ENST00000436638 MT1BP07438 61 aa2.66□□□□□ -1.98
ECHDC1-208ENST00000436638 USH2AO75445 5202 aa2.65□□□□□ -1.98
ECHDC1-208ENST00000436638 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
ECHDC1-208ENST00000436638 KRTAP19-6Q3LI70 58 aa2.63□□□□□ -1.99
ECHDC1-208ENST00000436638 A0A0D9SG42 100 aa2.62□□□□□ -1.99
ECHDC1-208ENST00000436638 KRTAP5-9P26371 169 aa2.62□□□□□ -1.99
ECHDC1-208ENST00000436638 KRTAP13-4Q3LI77 160 aa2.62□□□□□ -1.99
ECHDC1-208ENST00000436638 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
ECHDC1-208ENST00000436638 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
ECHDC1-208ENST00000436638 KRTAP12-1P59990 96 aa2.53□□□□□ -2
ECHDC1-208ENST00000436638 MT1XP80297 61 aa2.53□□□□□ -2
ECHDC1-208ENST00000436638 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2
ECHDC1-208ENST00000436638 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
ECHDC1-208ENST00000436638 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
ECHDC1-208ENST00000436638 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
ECHDC1-208ENST00000436638 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
ECHDC1-208ENST00000436638 TNP1P09430 55 aa2.42□□□□□ -2.02
ECHDC1-208ENST00000436638 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
ECHDC1-208ENST00000436638 KRTAP8-1Q8IUC2 63 aa2.41□□□□□ -2.02
ECHDC1-208ENST00000436638 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-208ENST00000436638 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
ECHDC1-208ENST00000436638 KMT2DO14686 5537 aa2.3□□□□□ -2.04
ECHDC1-208ENST00000436638 NEBP20929 6669 aa2.29□□□□□ -2.04
ECHDC1-208ENST00000436638 SPRR2EP22531 72 aa2.29□□□□□ -2.04
ECHDC1-208ENST00000436638 SPRR2BP35325 72 aa2.29□□□□□ -2.04
ECHDC1-208ENST00000436638 SPRR2AP35326 72 aa2.29□□□□□ -2.04
ECHDC1-208ENST00000436638 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
ECHDC1-208ENST00000436638 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
ECHDC1-208ENST00000436638 KRTAP19-7Q3SYF9 63 aa2.25□□□□□ -2.05
ECHDC1-208ENST00000436638 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
ECHDC1-208ENST00000436638 MT1EP04732 61 aa2.24□□□□□ -2.05
ECHDC1-208ENST00000436638 KRTAP12-3P60328 96 aa2.23□□□□□ -2.05
ECHDC1-208ENST00000436638 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
ECHDC1-208ENST00000436638 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
ECHDC1-208ENST00000436638 SPRR2DP22532 72 aa2.21□□□□□ -2.06
ECHDC1-208ENST00000436638 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
ECHDC1-208ENST00000436638 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
ECHDC1-208ENST00000436638 MT1GP13640 62 aa2.18□□□□□ -2.06
ECHDC1-208ENST00000436638 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
ECHDC1-208ENST00000436638 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
ECHDC1-208ENST00000436638 MT1LQ93083 61 aa2.17□□□□□ -2.06
ECHDC1-208ENST00000436638 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
ECHDC1-208ENST00000436638 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
ECHDC1-208ENST00000436638 KRTAP12-4P60329 112 aa2.15□□□□□ -2.07
ECHDC1-208ENST00000436638 MT1MQ8N339 61 aa2.12□□□□□ -2.07
ECHDC1-208ENST00000436638 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
ECHDC1-208ENST00000436638 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
ECHDC1-208ENST00000436638 MT4P47944 62 aa1.91□□□□□ -2.1
ECHDC1-208ENST00000436638 MT1AP04731 61 aa1.86□□□□□ -2.11
ECHDC1-208ENST00000436638 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
ECHDC1-208ENST00000436638 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
ECHDC1-208ENST00000436638 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
ECHDC1-208ENST00000436638 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
ECHDC1-208ENST00000436638 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
ECHDC1-208ENST00000436638 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
ECHDC1-208ENST00000436638 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
ECHDC1-208ENST00000436638 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
ECHDC1-208ENST00000436638 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
ECHDC1-208ENST00000436638 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
ECHDC1-208ENST00000436638 PRM1P04553 51 aa1.66□□□□□ -2.14
ECHDC1-208ENST00000436638 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
ECHDC1-208ENST00000436638 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
ECHDC1-208ENST00000436638 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
ECHDC1-208ENST00000436638 AHNAKQ09666 5890 aaKnown RBP1.38□□□□□ -2.19
ECHDC1-208ENST00000436638 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
ECHDC1-208ENST00000436638 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
ECHDC1-208ENST00000436638 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
ECHDC1-208ENST00000436638 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 119.8 ms