RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 KRTAP20-2Q3LI61 65 aa5.89□□□□□ -1.47
CNOT9-204ENST00000432877 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
CNOT9-204ENST00000432877 K7ERU9 68 aa5.85□□□□□ -1.47
CNOT9-204ENST00000432877 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
CNOT9-204ENST00000432877 H3BS24 57 aa5.8□□□□□ -1.48
CNOT9-204ENST00000432877 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
CNOT9-204ENST00000432877 KRTAP5-5Q701N2 237 aaPredicted RBP5.79□□□□□ -1.48
CNOT9-204ENST00000432877 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
CNOT9-204ENST00000432877 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
CNOT9-204ENST00000432877 A8MU10 97 aa5.74□□□□□ -1.49
CNOT9-204ENST00000432877 A0A1B0GU69 56 aa5.73□□□□□ -1.49
CNOT9-204ENST00000432877 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
CNOT9-204ENST00000432877 H7BZZ5 65 aa5.59□□□□□ -1.51
CNOT9-204ENST00000432877 COX7CP15954 63 aa5.58□□□□□ -1.52
CNOT9-204ENST00000432877 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
CNOT9-204ENST00000432877 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
CNOT9-204ENST00000432877 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
CNOT9-204ENST00000432877 PRR15LQ9BU68 103 aa5.49□□□□□ -1.53
CNOT9-204ENST00000432877 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
CNOT9-204ENST00000432877 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
CNOT9-204ENST00000432877 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
CNOT9-204ENST00000432877 LINC01558Q9Y6Z2 57 aa5.3□□□□□ -1.56
CNOT9-204ENST00000432877 UQCR11O14957 56 aa5.28□□□□□ -1.56
CNOT9-204ENST00000432877 MT1AP04731 61 aa5.28□□□□□ -1.56
CNOT9-204ENST00000432877 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
CNOT9-204ENST00000432877 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
CNOT9-204ENST00000432877 AHNAKQ09666 5890 aaKnown RBP5.25□□□□□ -1.57
CNOT9-204ENST00000432877 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
CNOT9-204ENST00000432877 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
CNOT9-204ENST00000432877 MUC5BQ9HC84 5762 aaPredicted RBP5.22□□□□□ -1.57
CNOT9-204ENST00000432877 MUC5ACP98088 5654 aa5.22□□□□□ -1.57
CNOT9-204ENST00000432877 ATP5EP56381 51 aaPredicted RBP5.19□□□□□ -1.58
CNOT9-204ENST00000432877 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
CNOT9-204ENST00000432877 K7ERS5 55 aa5.14□□□□□ -1.59
CNOT9-204ENST00000432877 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
CNOT9-204ENST00000432877 ANAPC13Q9BS18 74 aa5.13□□□□□ -1.59
CNOT9-204ENST00000432877 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
CNOT9-204ENST00000432877 KRTAP6-2Q3LI66 62 aa5.1□□□□□ -1.59
CNOT9-204ENST00000432877 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
CNOT9-204ENST00000432877 CCDC179H3BU77 68 aa5.02□□□□□ -1.61
CNOT9-204ENST00000432877 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
CNOT9-204ENST00000432877 PCP4P48539 62 aa4.93□□□□□ -1.62
CNOT9-204ENST00000432877 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
CNOT9-204ENST00000432877 MT3P25713 68 aa4.89□□□□□ -1.63
CNOT9-204ENST00000432877 TMEM258P61165 79 aa4.86□□□□□ -1.63
CNOT9-204ENST00000432877 RPS28P62857 69 aaKnown RBP4.83□□□□□ -1.64
CNOT9-204ENST00000432877 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
CNOT9-204ENST00000432877 Q1T7F1 81 aa4.76□□□□□ -1.65
CNOT9-204ENST00000432877 V9GYY9 64 aa4.76□□□□□ -1.65
CNOT9-204ENST00000432877 PSPHP1O15172 72 aa4.72□□□□□ -1.65
CNOT9-204ENST00000432877 ROMO1P60602 79 aa4.66□□□□□ -1.66
CNOT9-204ENST00000432877 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
CNOT9-204ENST00000432877 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
CNOT9-204ENST00000432877 A6NED7 52 aa4.56□□□□□ -1.68
CNOT9-204ENST00000432877 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
CNOT9-204ENST00000432877 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
CNOT9-204ENST00000432877 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
CNOT9-204ENST00000432877 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
CNOT9-204ENST00000432877 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
CNOT9-204ENST00000432877 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
CNOT9-204ENST00000432877 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
CNOT9-204ENST00000432877 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
CNOT9-204ENST00000432877 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
CNOT9-204ENST00000432877 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
CNOT9-204ENST00000432877 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
CNOT9-204ENST00000432877 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
CNOT9-204ENST00000432877 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
CNOT9-204ENST00000432877 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
CNOT9-204ENST00000432877 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
CNOT9-204ENST00000432877 PMAIP1Q13794 54 aa3.18□□□□□ -1.9
CNOT9-204ENST00000432877 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
CNOT9-204ENST00000432877 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
CNOT9-204ENST00000432877 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
CNOT9-204ENST00000432877 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
CNOT9-204ENST00000432877 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
CNOT9-204ENST00000432877 PRM1P04553 51 aa2.32□□□□□ -2.04
CNOT9-204ENST00000432877 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
CNOT9-204ENST00000432877 INE1O15225 51 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 137.9 ms