RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ITPR2Q14571 2701 aa0.51□□□□□ -2.33
CLK1-204ENST00000432425 PKD1P98161 4303 aa0.51□□□□□ -2.33
CLK1-204ENST00000432425 APOBP04114 4563 aaKnown RBP0.51□□□□□ -2.33
CLK1-204ENST00000432425 MAST4O15021 2626 aa0.5□□□□□ -2.33
CLK1-204ENST00000432425 DNAH6Q9C0G6 4158 aa0.5□□□□□ -2.33
CLK1-204ENST00000432425 LRP1Q07954 4544 aaKnown RBP0.5□□□□□ -2.33
CLK1-204ENST00000432425 TEP1Q99973 2627 aaKnown RBP0.5□□□□□ -2.33
CLK1-204ENST00000432425 FAT1Q14517 4588 aa0.5□□□□□ -2.33
CLK1-204ENST00000432425 MGAM2Q2M2H8 2515 aa0.5□□□□□ -2.33
CLK1-204ENST00000432425 IGSF10Q6WRI0 2623 aa0.5□□□□□ -2.33
CLK1-204ENST00000432425 PLECQ15149 4684 aaKnown RBP0.49□□□□□ -2.33
CLK1-204ENST00000432425 CMYA5Q8N3K9 4069 aa0.49□□□□□ -2.33
CLK1-204ENST00000432425 DNAH5Q8TE73 4624 aa0.49□□□□□ -2.33
CLK1-204ENST00000432425 KRTAP8-1Q8IUC2 63 aa0.49□□□□□ -2.33
CLK1-204ENST00000432425 STARD9Q9P2P6 4700 aa0.49□□□□□ -2.33
CLK1-204ENST00000432425 FLGP20930 4061 aaPredicted RBP0.49□□□□□ -2.33
CLK1-204ENST00000432425 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
CLK1-204ENST00000432425 LRP1BQ9NZR2 4599 aa0.48□□□□□ -2.33
CLK1-204ENST00000432425 RPS29P62273 56 aaKnown RBP0.46□□□□□ -2.34
CLK1-204ENST00000432425 DYNC1H1Q14204 4646 aaKnown RBP0.46□□□□□ -2.34
CLK1-204ENST00000432425 SMR3BP02814 79 aaPredicted RBP0.45□□□□□ -2.34
CLK1-204ENST00000432425 SPRR2DP22532 72 aa0.45□□□□□ -2.34
CLK1-204ENST00000432425 KRTAP21-1Q3LI58 79 aa0.45□□□□□ -2.34
CLK1-204ENST00000432425 PKHD1P08F94 4074 aa0.45□□□□□ -2.34
CLK1-204ENST00000432425 KRTAP6-2Q3LI66 62 aa0.44□□□□□ -2.34
CLK1-204ENST00000432425 LPAP08519 4548 aa0.43□□□□□ -2.34
CLK1-204ENST00000432425 MUC17Q685J3 4493 aa0.42□□□□□ -2.34
CLK1-204ENST00000432425 SPRR2BP35325 72 aa0.42□□□□□ -2.34
CLK1-204ENST00000432425 KRTAP19-2Q3LHN2 52 aa0.42□□□□□ -2.34
CLK1-204ENST00000432425 KRTAP19-5Q3LI72 72 aa0.42□□□□□ -2.34
CLK1-204ENST00000432425 LRP2P98164 4655 aa0.42□□□□□ -2.34
CLK1-204ENST00000432425 HERC1Q15751 4861 aa0.41□□□□□ -2.34
CLK1-204ENST00000432425 MT1AP04731 61 aa0.4□□□□□ -2.34
CLK1-204ENST00000432425 MT1HL1P0DM35 61 aa0.4□□□□□ -2.34
CLK1-204ENST00000432425 HYDINQ4G0P3 5121 aa0.4□□□□□ -2.35
CLK1-204ENST00000432425 HMCN2Q8NDA2 5059 aa0.38□□□□□ -2.35
CLK1-204ENST00000432425 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
CLK1-204ENST00000432425 NEBP20929 6669 aa0.38□□□□□ -2.35
CLK1-204ENST00000432425 SPRR2AP35326 72 aa0.38□□□□□ -2.35
CLK1-204ENST00000432425 DNHD1Q96M86 4753 aa0.38□□□□□ -2.35
CLK1-204ENST00000432425 KMT2CQ8NEZ4 4911 aaKnown RBP0.38□□□□□ -2.35
CLK1-204ENST00000432425 MT1XP80297 61 aa0.37□□□□□ -2.35
CLK1-204ENST00000432425 SPRR2GQ9BYE4 73 aa0.37□□□□□ -2.35
CLK1-204ENST00000432425 MT1BP07438 61 aa0.37□□□□□ -2.35
CLK1-204ENST00000432425 MT1FP04733 61 aa0.36□□□□□ -2.35
CLK1-204ENST00000432425 SPRR2FQ96RM1 72 aa0.36□□□□□ -2.35
CLK1-204ENST00000432425 DSTQ03001 7570 aaKnown RBP0.35□□□□□ -2.35
CLK1-204ENST00000432425 SPRR2EP22531 72 aa0.35□□□□□ -2.35
CLK1-204ENST00000432425 KRTAP19-8Q3LI54 63 aa0.35□□□□□ -2.35
CLK1-204ENST00000432425 MT2AP02795 61 aa0.34□□□□□ -2.35
CLK1-204ENST00000432425 RYR1P21817 5038 aa0.34□□□□□ -2.36
CLK1-204ENST00000432425 FAT4Q6V0I7 4981 aa0.34□□□□□ -2.36
CLK1-204ENST00000432425 RYR2Q92736 4967 aa0.34□□□□□ -2.36
CLK1-204ENST00000432425 HERC2O95714 4834 aa0.33□□□□□ -2.36
CLK1-204ENST00000432425 MT1HP80294 61 aa0.33□□□□□ -2.36
CLK1-204ENST00000432425 KRTAP19-7Q3SYF9 63 aa0.33□□□□□ -2.36
CLK1-204ENST00000432425 MT1LQ93083 61 aa0.33□□□□□ -2.36
CLK1-204ENST00000432425 RYR3Q15413 4870 aa0.32□□□□□ -2.36
CLK1-204ENST00000432425 MUC2Q02817 5179 aa0.32□□□□□ -2.36
CLK1-204ENST00000432425 SSPOA2VEC9 5147 aa0.32□□□□□ -2.36
CLK1-204ENST00000432425 PCLOQ9Y6V0 5065 aa0.31□□□□□ -2.36
CLK1-204ENST00000432425 BIRC6Q9NR09 4857 aa0.31□□□□□ -2.36
CLK1-204ENST00000432425 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
CLK1-204ENST00000432425 MT1EP04732 61 aa0.31□□□□□ -2.36
CLK1-204ENST00000432425 MT1GP13640 62 aa0.31□□□□□ -2.36
CLK1-204ENST00000432425 KIAA1109Q2LD37 5005 aa0.31□□□□□ -2.36
CLK1-204ENST00000432425 UBR4Q5T4S7 5183 aa0.3□□□□□ -2.36
CLK1-204ENST00000432425 ABCA13Q86UQ4 5058 aa0.29□□□□□ -2.36
CLK1-204ENST00000432425 EPPK1P58107 5090 aaKnown RBP0.29□□□□□ -2.36
CLK1-204ENST00000432425 KRTAP6-1Q3LI64 71 aa0.28□□□□□ -2.36
CLK1-204ENST00000432425 MT1MQ8N339 61 aa0.28□□□□□ -2.36
CLK1-204ENST00000432425 USH2AO75445 5202 aa0.26□□□□□ -2.37
CLK1-204ENST00000432425 RNF213Q63HN8 5207 aa0.25□□□□□ -2.37
CLK1-204ENST00000432425 KRTAP19-6Q3LI70 58 aa0.22□□□□□ -2.37
CLK1-204ENST00000432425 MUC12Q9UKN1 5478 aa0.2□□□□□ -2.38
CLK1-204ENST00000432425 MT4P47944 62 aa0.16□□□□□ -2.38
CLK1-204ENST00000432425 KRTAP20-2Q3LI61 65 aa0.16□□□□□ -2.38
CLK1-204ENST00000432425 KRTAP20-1Q3LI63 56 aa0.11□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 107.7 ms