RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
NUP50-208ENST00000430547 MIR22HGQ0VDD5 57 aa6.11□□□□□ -1.43
NUP50-208ENST00000430547 KRTAP12-3P60328 96 aa6.08□□□□□ -1.44
NUP50-208ENST00000430547 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
NUP50-208ENST00000430547 KRTAP4-3Q9BYR4 195 aa6.07□□□□□ -1.44
NUP50-208ENST00000430547 K7ERS5 55 aa6.06□□□□□ -1.44
NUP50-208ENST00000430547 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
NUP50-208ENST00000430547 V9GYY9 64 aa6.03□□□□□ -1.44
NUP50-208ENST00000430547 MT4P47944 62 aa6.02□□□□□ -1.45
NUP50-208ENST00000430547 GPR98Q8WXG9 6306 aa6.02□□□□□ -1.45
NUP50-208ENST00000430547 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
NUP50-208ENST00000430547 PSPHP1O15172 72 aa5.98□□□□□ -1.45
NUP50-208ENST00000430547 HMCN1Q96RW7 5635 aa5.94□□□□□ -1.46
NUP50-208ENST00000430547 Q1T7F1 81 aa5.93□□□□□ -1.46
NUP50-208ENST00000430547 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
NUP50-208ENST00000430547 KRTAP5-4Q6L8H1 288 aa5.92□□□□□ -1.46
NUP50-208ENST00000430547 A6NED7 52 aa5.81□□□□□ -1.48
NUP50-208ENST00000430547 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
NUP50-208ENST00000430547 RPS28P62857 69 aaKnown RBP5.77□□□□□ -1.49
NUP50-208ENST00000430547 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
NUP50-208ENST00000430547 AHNAK2Q8IVF2 5795 aa5.74□□□□□ -1.49
NUP50-208ENST00000430547 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
NUP50-208ENST00000430547 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
NUP50-208ENST00000430547 KRTAP5-5Q701N2 237 aaPredicted RBP5.68□□□□□ -1.5
NUP50-208ENST00000430547 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
NUP50-208ENST00000430547 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
NUP50-208ENST00000430547 KRTAP12-4P60329 112 aa5.61□□□□□ -1.51
NUP50-208ENST00000430547 KRTAP20-2Q3LI61 65 aa5.61□□□□□ -1.51
NUP50-208ENST00000430547 KRTAP5-10Q6L8G5 202 aa5.61□□□□□ -1.51
NUP50-208ENST00000430547 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
NUP50-208ENST00000430547 ROMO1P60602 79 aa5.59□□□□□ -1.51
NUP50-208ENST00000430547 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
NUP50-208ENST00000430547 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
NUP50-208ENST00000430547 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.54
NUP50-208ENST00000430547 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.54
NUP50-208ENST00000430547 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
NUP50-208ENST00000430547 MT1AP04731 61 aa5.33□□□□□ -1.56
NUP50-208ENST00000430547 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
NUP50-208ENST00000430547 PRO0628Q9UI54 55 aa5.24□□□□□ -1.57
NUP50-208ENST00000430547 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
NUP50-208ENST00000430547 BRK1Q8WUW1 75 aa5.19□□□□□ -1.58
NUP50-208ENST00000430547 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
NUP50-208ENST00000430547 KRTAP9-4Q9BYQ2 154 aa5.14□□□□□ -1.59
NUP50-208ENST00000430547 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
NUP50-208ENST00000430547 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
NUP50-208ENST00000430547 PMAIP1Q13794 54 aa4.94□□□□□ -1.62
NUP50-208ENST00000430547 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
NUP50-208ENST00000430547 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
NUP50-208ENST00000430547 MT3P25713 68 aa4.89□□□□□ -1.63
NUP50-208ENST00000430547 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
NUP50-208ENST00000430547 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
NUP50-208ENST00000430547 MUC5ACP98088 5654 aa4.7□□□□□ -1.66
NUP50-208ENST00000430547 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
NUP50-208ENST00000430547 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
NUP50-208ENST00000430547 KRTAP5-1Q6L8H4 278 aa4.64□□□□□ -1.67
NUP50-208ENST00000430547 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
NUP50-208ENST00000430547 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
NUP50-208ENST00000430547 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
NUP50-208ENST00000430547 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
NUP50-208ENST00000430547 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
NUP50-208ENST00000430547 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
NUP50-208ENST00000430547 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
NUP50-208ENST00000430547 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
NUP50-208ENST00000430547 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
NUP50-208ENST00000430547 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
NUP50-208ENST00000430547 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
NUP50-208ENST00000430547 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
NUP50-208ENST00000430547 H3BS24 57 aa3.69□□□□□ -1.82
NUP50-208ENST00000430547 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
NUP50-208ENST00000430547 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
NUP50-208ENST00000430547 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
NUP50-208ENST00000430547 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
NUP50-208ENST00000430547 INE1O15225 51 aa3.24□□□□□ -1.89
NUP50-208ENST00000430547 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
NUP50-208ENST00000430547 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
NUP50-208ENST00000430547 PRM1P04553 51 aa2.85□□□□□ -1.95
NUP50-208ENST00000430547 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
NUP50-208ENST00000430547 MUC16Q8WXI7 14507 aa2.11□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 46.1 ms