RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 MT1GP13640 62 aa4.34□□□□□ -1.71
TTC3-208ENST00000428693 SMIM26A0A096LP01 95 aa4.33□□□□□ -1.72
TTC3-208ENST00000428693 A8MU10 97 aa4.31□□□□□ -1.72
TTC3-208ENST00000428693 H7BZZ5 65 aa4.31□□□□□ -1.72
TTC3-208ENST00000428693 MT4P47944 62 aa4.28□□□□□ -1.72
TTC3-208ENST00000428693 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
TTC3-208ENST00000428693 MT1MQ8N339 61 aa4.27□□□□□ -1.73
TTC3-208ENST00000428693 MT1LQ93083 61 aa4.26□□□□□ -1.73
TTC3-208ENST00000428693 TNP1P09430 55 aa4.25□□□□□ -1.73
TTC3-208ENST00000428693 LCE3AQ5TA76 89 aa4.25□□□□□ -1.73
TTC3-208ENST00000428693 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
TTC3-208ENST00000428693 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
TTC3-208ENST00000428693 ANAPC13Q9BS18 74 aa4.19□□□□□ -1.74
TTC3-208ENST00000428693 PRR15LQ9BU68 103 aa4.18□□□□□ -1.74
TTC3-208ENST00000428693 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
TTC3-208ENST00000428693 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
TTC3-208ENST00000428693 CCDC179H3BU77 68 aa4.09□□□□□ -1.75
TTC3-208ENST00000428693 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
TTC3-208ENST00000428693 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
TTC3-208ENST00000428693 PCP4P48539 62 aa4.07□□□□□ -1.76
TTC3-208ENST00000428693 ATP5EP56381 51 aaPredicted RBP4.05□□□□□ -1.76
TTC3-208ENST00000428693 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
TTC3-208ENST00000428693 UQCR11O14957 56 aa4.01□□□□□ -1.77
TTC3-208ENST00000428693 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
TTC3-208ENST00000428693 MIR22HGQ0VDD5 57 aa3.92□□□□□ -1.78
TTC3-208ENST00000428693 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
TTC3-208ENST00000428693 K7ERS5 55 aa3.91□□□□□ -1.78
TTC3-208ENST00000428693 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
TTC3-208ENST00000428693 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
TTC3-208ENST00000428693 TMEM258P61165 79 aa3.9□□□□□ -1.79
TTC3-208ENST00000428693 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
TTC3-208ENST00000428693 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
TTC3-208ENST00000428693 MT3P25713 68 aa3.86□□□□□ -1.79
TTC3-208ENST00000428693 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
TTC3-208ENST00000428693 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
TTC3-208ENST00000428693 PSPHP1O15172 72 aa3.81□□□□□ -1.8
TTC3-208ENST00000428693 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
TTC3-208ENST00000428693 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
TTC3-208ENST00000428693 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
TTC3-208ENST00000428693 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
TTC3-208ENST00000428693 V9GYY9 64 aa3.74□□□□□ -1.81
TTC3-208ENST00000428693 A6NED7 52 aa3.67□□□□□ -1.82
TTC3-208ENST00000428693 Q1T7F1 81 aa3.67□□□□□ -1.82
TTC3-208ENST00000428693 CDC42SE1Q9NRR8 79 aa3.66□□□□□ -1.82
TTC3-208ENST00000428693 MT1AP04731 61 aa3.62□□□□□ -1.83
TTC3-208ENST00000428693 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
TTC3-208ENST00000428693 RPS28P62857 69 aaKnown RBP3.61□□□□□ -1.83
TTC3-208ENST00000428693 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
TTC3-208ENST00000428693 ROMO1P60602 79 aa3.58□□□□□ -1.84
TTC3-208ENST00000428693 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
TTC3-208ENST00000428693 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
TTC3-208ENST00000428693 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
TTC3-208ENST00000428693 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
TTC3-208ENST00000428693 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
TTC3-208ENST00000428693 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
TTC3-208ENST00000428693 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
TTC3-208ENST00000428693 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
TTC3-208ENST00000428693 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
TTC3-208ENST00000428693 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
TTC3-208ENST00000428693 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
TTC3-208ENST00000428693 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
TTC3-208ENST00000428693 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
TTC3-208ENST00000428693 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
TTC3-208ENST00000428693 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
TTC3-208ENST00000428693 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
TTC3-208ENST00000428693 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
TTC3-208ENST00000428693 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
TTC3-208ENST00000428693 PRO0628Q9UI54 55 aa2.8□□□□□ -1.96
TTC3-208ENST00000428693 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
TTC3-208ENST00000428693 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
TTC3-208ENST00000428693 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
TTC3-208ENST00000428693 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
TTC3-208ENST00000428693 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
TTC3-208ENST00000428693 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
TTC3-208ENST00000428693 PRM1P04553 51 aa1.84□□□□□ -2.11
TTC3-208ENST00000428693 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
TTC3-208ENST00000428693 INE1O15225 51 aa1.59□□□□□ -2.15
TTC3-208ENST00000428693 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms