RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 TNP1P09430 55 aa4.28□□□□□ -1.72
PDE6D-203ENST00000428104 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
PDE6D-203ENST00000428104 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
PDE6D-203ENST00000428104 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
PDE6D-203ENST00000428104 MT1AP04731 61 aa4.23□□□□□ -1.73
PDE6D-203ENST00000428104 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
PDE6D-203ENST00000428104 F8W1H4 67 aa4.2□□□□□ -1.74
PDE6D-203ENST00000428104 SMIM6P0DI80 62 aa4.2□□□□□ -1.74
PDE6D-203ENST00000428104 FAM240AA0A1B0GVK7 77 aa4.18□□□□□ -1.74
PDE6D-203ENST00000428104 LINC00643Q86TS7 51 aa4.13□□□□□ -1.75
PDE6D-203ENST00000428104 GTF2H5Q6ZYL4 71 aa4.12□□□□□ -1.75
PDE6D-203ENST00000428104 COL5A1-AS1Q5SY13 56 aa4.11□□□□□ -1.75
PDE6D-203ENST00000428104 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.75
PDE6D-203ENST00000428104 A0A1B0GU33 70 aa4.05□□□□□ -1.76
PDE6D-203ENST00000428104 SCGB1A1P11684 91 aa4.05□□□□□ -1.76
PDE6D-203ENST00000428104 SERP1Q9Y6X1 66 aa4.03□□□□□ -1.76
PDE6D-203ENST00000428104 SEC61GP60059 68 aa4.02□□□□□ -1.77
PDE6D-203ENST00000428104 A8MU10 97 aa3.98□□□□□ -1.77
PDE6D-203ENST00000428104 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
PDE6D-203ENST00000428104 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
PDE6D-203ENST00000428104 SMIM26A0A096LP01 95 aa3.92□□□□□ -1.78
PDE6D-203ENST00000428104 MT3P25713 68 aa3.9□□□□□ -1.79
PDE6D-203ENST00000428104 SNURFQ9Y675 71 aa3.85□□□□□ -1.79
PDE6D-203ENST00000428104 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.79
PDE6D-203ENST00000428104 COA5Q86WW8 74 aa3.83□□□□□ -1.8
PDE6D-203ENST00000428104 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
PDE6D-203ENST00000428104 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
PDE6D-203ENST00000428104 SERP2Q8N6R1 65 aa3.71□□□□□ -1.82
PDE6D-203ENST00000428104 SMIM20Q8N5G0 67 aa3.69□□□□□ -1.82
PDE6D-203ENST00000428104 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
PDE6D-203ENST00000428104 LOC105371267A0A1B0GV96 52 aa3.63□□□□□ -1.83
PDE6D-203ENST00000428104 A0A1B0GU69 56 aa3.62□□□□□ -1.83
PDE6D-203ENST00000428104 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
PDE6D-203ENST00000428104 PCP4L1A6NKN8 68 aa3.43□□□□□ -1.86
PDE6D-203ENST00000428104 H7BZZ5 65 aa3.43□□□□□ -1.86
PDE6D-203ENST00000428104 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
PDE6D-203ENST00000428104 J3QR89 54 aa3.41□□□□□ -1.86
PDE6D-203ENST00000428104 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
PDE6D-203ENST00000428104 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
PDE6D-203ENST00000428104 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
PDE6D-203ENST00000428104 A0A1B0GV90 55 aa3.22□□□□□ -1.89
PDE6D-203ENST00000428104 UQCR11O14957 56 aa3.14□□□□□ -1.91
PDE6D-203ENST00000428104 RPS28P62857 69 aaKnown RBP3.12□□□□□ -1.91
PDE6D-203ENST00000428104 A0A0A0MQY5 61 aa3.11□□□□□ -1.91
PDE6D-203ENST00000428104 PCP4P48539 62 aa3.11□□□□□ -1.91
PDE6D-203ENST00000428104 K7ERS5 55 aa3.08□□□□□ -1.92
PDE6D-203ENST00000428104 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
PDE6D-203ENST00000428104 LINC01558Q9Y6Z2 57 aa3.06□□□□□ -1.92
PDE6D-203ENST00000428104 SVIPQ8NHG7 77 aa3.03□□□□□ -1.92
PDE6D-203ENST00000428104 MIR22HGQ0VDD5 57 aa3.02□□□□□ -1.93
PDE6D-203ENST00000428104 COX7CP15954 63 aa3.01□□□□□ -1.93
PDE6D-203ENST00000428104 K7ERU9 68 aa2.93□□□□□ -1.94
PDE6D-203ENST00000428104 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
PDE6D-203ENST00000428104 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
PDE6D-203ENST00000428104 CDC42SE1Q9NRR8 79 aa2.83□□□□□ -1.96
PDE6D-203ENST00000428104 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
PDE6D-203ENST00000428104 ROMO1P60602 79 aa2.75□□□□□ -1.97
PDE6D-203ENST00000428104 Q1T7F1 81 aa2.74□□□□□ -1.97
PDE6D-203ENST00000428104 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
PDE6D-203ENST00000428104 ATP5EP56381 51 aaPredicted RBP2.65□□□□□ -1.99
PDE6D-203ENST00000428104 NDUFAF8A1L188 74 aa2.58□□□□□ -2
PDE6D-203ENST00000428104 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
PDE6D-203ENST00000428104 PRAC1Q96KF2 57 aa2.58□□□□□ -2
PDE6D-203ENST00000428104 PSPHP1O15172 72 aa2.56□□□□□ -2
PDE6D-203ENST00000428104 CCDC179H3BU77 68 aa2.51□□□□□ -2.01
PDE6D-203ENST00000428104 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
PDE6D-203ENST00000428104 ANAPC13Q9BS18 74 aa2.47□□□□□ -2.01
PDE6D-203ENST00000428104 A6NED7 52 aa2.39□□□□□ -2.03
PDE6D-203ENST00000428104 V9GYY9 64 aa2.31□□□□□ -2.04
PDE6D-203ENST00000428104 TMEM258P61165 79 aa2.29□□□□□ -2.04
PDE6D-203ENST00000428104 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
PDE6D-203ENST00000428104 PRM1P04553 51 aa1.39□□□□□ -2.19
PDE6D-203ENST00000428104 PRO0628Q9UI54 55 aa1.35□□□□□ -2.19
PDE6D-203ENST00000428104 PMAIP1Q13794 54 aa1.3□□□□□ -2.2
PDE6D-203ENST00000428104 LUZP6Q538Z0 58 aa1.27□□□□□ -2.21
PDE6D-203ENST00000428104 BRK1Q8WUW1 75 aa1.27□□□□□ -2.21
PDE6D-203ENST00000428104 KTN1-AS1Q86SY8 53 aa1.15□□□□□ -2.23
PDE6D-203ENST00000428104 INE1O15225 51 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 198.4 ms