RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 V9GYY9 64 aa9.57□□□□□ -0.88
LMO1-202ENST00000428101 TNP1P09430 55 aa9.54□□□□□ -0.88
LMO1-202ENST00000428101 LCE4AQ5TA78 99 aa9.54□□□□□ -0.88
LMO1-202ENST00000428101 Q1T7F1 81 aa9.5□□□□□ -0.89
LMO1-202ENST00000428101 KRTAP4-3Q9BYR4 195 aa9.5□□□□□ -0.89
LMO1-202ENST00000428101 MT4P47944 62 aa9.48□□□□□ -0.89
LMO1-202ENST00000428101 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.9
LMO1-202ENST00000428101 PSPHP1O15172 72 aa9.44□□□□□ -0.9
LMO1-202ENST00000428101 PCP4P48539 62 aa9.44□□□□□ -0.9
LMO1-202ENST00000428101 HMCN1Q96RW7 5635 aa9.43□□□□□ -0.9
LMO1-202ENST00000428101 KRTAP5-4Q6L8H1 288 aa9.37□□□□□ -0.91
LMO1-202ENST00000428101 RPS28P62857 69 aaKnown RBP9.28□□□□□ -0.92
LMO1-202ENST00000428101 K7ERS5 55 aa9.24□□□□□ -0.93
LMO1-202ENST00000428101 KRTAP4-6Q9BYQ5 205 aa9.23□□□□□ -0.93
LMO1-202ENST00000428101 KRTAP4-7Q9BYR0 210 aa9.23□□□□□ -0.93
LMO1-202ENST00000428101 KRTAP12-3P60328 96 aa9.22□□□□□ -0.93
LMO1-202ENST00000428101 A6NED7 52 aa9.16□□□□□ -0.94
LMO1-202ENST00000428101 AHNAK2Q8IVF2 5795 aa9.13□□□□□ -0.95
LMO1-202ENST00000428101 KRTAP5-10Q6L8G5 202 aa9.05□□□□□ -0.96
LMO1-202ENST00000428101 KRTAP25-1Q3LHN0 102 aa9.02□□□□□ -0.97
LMO1-202ENST00000428101 KRTAP5-5Q701N2 237 aaPredicted RBP8.93□□□□□ -0.98
LMO1-202ENST00000428101 KRTAP20-2Q3LI61 65 aa8.85□□□□□ -0.99
LMO1-202ENST00000428101 CDC42SE1Q9NRR8 79 aa8.8□□□□□ -1
LMO1-202ENST00000428101 KRTAP5-3Q6L8H2 238 aa8.79□□□□□ -1
LMO1-202ENST00000428101 SPRR5A0A1B0GTR4 108 aa8.77□□□□□ -1.01
LMO1-202ENST00000428101 LOC100996750A0A140TA64 210 aa8.75□□□□□ -1.01
LMO1-202ENST00000428101 KRTAP5-7Q6L8G8 165 aa8.72□□□□□ -1.01
LMO1-202ENST00000428101 KRTAP23-1A1A580 65 aa8.71□□□□□ -1.02
LMO1-202ENST00000428101 KRTAP12-4P60329 112 aa8.69□□□□□ -1.02
LMO1-202ENST00000428101 ROMO1P60602 79 aa8.66□□□□□ -1.02
LMO1-202ENST00000428101 KRTAP19-4Q3LI73 84 aa8.66□□□□□ -1.02
LMO1-202ENST00000428101 SYNE1Q8NF91 8797 aaKnown RBP8.54□□□□□ -1.04
LMO1-202ENST00000428101 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
LMO1-202ENST00000428101 LCE3CQ5T5A8 94 aa8.48□□□□□ -1.05
LMO1-202ENST00000428101 MT1AP04731 61 aa8.22□□□□□ -1.09
LMO1-202ENST00000428101 KRTAP6-1Q3LI64 71 aa8.21□□□□□ -1.1
LMO1-202ENST00000428101 KRTAP5-2Q701N4 177 aa8.19□□□□□ -1.1
LMO1-202ENST00000428101 BRK1Q8WUW1 75 aa8.19□□□□□ -1.1
LMO1-202ENST00000428101 KRTAP4-11Q9BYQ6 195 aa8.13□□□□□ -1.11
LMO1-202ENST00000428101 KRTAP9-6A8MVA2 160 aa8.05□□□□□ -1.12
LMO1-202ENST00000428101 KRTAP9-4Q9BYQ2 154 aa7.99□□□□□ -1.13
LMO1-202ENST00000428101 KRTAP6-2Q3LI66 62 aa7.88□□□□□ -1.15
LMO1-202ENST00000428101 KRTAP5-8O75690 187 aa7.87□□□□□ -1.15
LMO1-202ENST00000428101 PMAIP1Q13794 54 aa7.72□□□□□ -1.17
LMO1-202ENST00000428101 OBSCNQ5VST9 7968 aa7.62□□□□□ -1.19
LMO1-202ENST00000428101 MUC5BQ9HC84 5762 aaPredicted RBP7.54□□□□□ -1.2
LMO1-202ENST00000428101 MT3P25713 68 aa7.52□□□□□ -1.21
LMO1-202ENST00000428101 MUC5ACP98088 5654 aa7.5□□□□□ -1.21
LMO1-202ENST00000428101 AHNAKQ09666 5890 aaKnown RBP7.47□□□□□ -1.21
LMO1-202ENST00000428101 KRTAP9-9Q9BYP9 154 aa7.46□□□□□ -1.22
LMO1-202ENST00000428101 KRTAP5-1Q6L8H4 278 aa7.38□□□□□ -1.23
LMO1-202ENST00000428101 PRO0628Q9UI54 55 aa7.38□□□□□ -1.23
LMO1-202ENST00000428101 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
LMO1-202ENST00000428101 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
LMO1-202ENST00000428101 LCE1EQ5T753 118 aa6.96□□□□□ -1.3
LMO1-202ENST00000428101 SVIPQ8NHG7 77 aa6.69□□□□□ -1.34
LMO1-202ENST00000428101 KRTAP4-2Q9BYR5 136 aa6.63□□□□□ -1.35
LMO1-202ENST00000428101 LCE1BQ5T7P3 118 aa6.57□□□□□ -1.36
LMO1-202ENST00000428101 LCE1CQ5T751 118 aa6.47□□□□□ -1.37
LMO1-202ENST00000428101 LUZP6Q538Z0 58 aa6.21□□□□□ -1.42
LMO1-202ENST00000428101 KRTAP4-12Q9BQ66 201 aa6.07□□□□□ -1.44
LMO1-202ENST00000428101 LCE3DQ9BYE3 92 aa6.05□□□□□ -1.44
LMO1-202ENST00000428101 KRTAP5-11Q6L8G4 156 aa5.88□□□□□ -1.47
LMO1-202ENST00000428101 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.88□□□□□ -1.47
LMO1-202ENST00000428101 LCE1FQ5T754 118 aa5.75□□□□□ -1.49
LMO1-202ENST00000428101 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
LMO1-202ENST00000428101 KRTAP21-2Q3LI59 83 aa5.42□□□□□ -1.54
LMO1-202ENST00000428101 PHGR1C9JFL3 82 aa5.25□□□□□ -1.57
LMO1-202ENST00000428101 NDUFAF8A1L188 74 aa5.21□□□□□ -1.58
LMO1-202ENST00000428101 KRTAP4-4Q9BYR3 166 aa4.99□□□□□ -1.61
LMO1-202ENST00000428101 MUC19Q7Z5P9 8384 aa4.69□□□□□ -1.66
LMO1-202ENST00000428101 PRM1P04553 51 aa4.44□□□□□ -1.7
LMO1-202ENST00000428101 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
LMO1-202ENST00000428101 INE1O15225 51 aa4.26□□□□□ -1.73
LMO1-202ENST00000428101 KRTAP21-1Q3LI58 79 aa3.98□□□□□ -1.77
LMO1-202ENST00000428101 MUC16Q8WXI7 14507 aa3.34□□□□□ -1.87
LMO1-202ENST00000428101 H3BS24 57 aa3.34□□□□□ -1.87
Retrieved 77 of 20,778 RNA–protein pairs in 63.4 ms