RNA–Protein interactions for RNA: ENST00000427786.1

PPP1CB-206, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 4

Gene PPP1CB, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-206ENST00000427786 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
PPP1CB-206ENST00000427786 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
PPP1CB-206ENST00000427786 HMCN1Q96RW7 5635 aa6.78□□□□□ -1.32
PPP1CB-206ENST00000427786 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
PPP1CB-206ENST00000427786 UQCR11O14957 56 aa6.76□□□□□ -1.33
PPP1CB-206ENST00000427786 KRTAP5-4Q6L8H1 288 aa6.7□□□□□ -1.34
PPP1CB-206ENST00000427786 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
PPP1CB-206ENST00000427786 MT4P47944 62 aa6.66□□□□□ -1.34
PPP1CB-206ENST00000427786 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
PPP1CB-206ENST00000427786 MIR22HGQ0VDD5 57 aa6.6□□□□□ -1.35
PPP1CB-206ENST00000427786 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
PPP1CB-206ENST00000427786 AHNAK2Q8IVF2 5795 aa6.55□□□□□ -1.36
PPP1CB-206ENST00000427786 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
PPP1CB-206ENST00000427786 Q1T7F1 81 aa6.46□□□□□ -1.38
PPP1CB-206ENST00000427786 PSPHP1O15172 72 aa6.45□□□□□ -1.38
PPP1CB-206ENST00000427786 KRTAP5-5Q701N2 237 aaPredicted RBP6.45□□□□□ -1.38
PPP1CB-206ENST00000427786 V9GYY9 64 aa6.45□□□□□ -1.38
PPP1CB-206ENST00000427786 K7ERS5 55 aa6.42□□□□□ -1.38
PPP1CB-206ENST00000427786 KRTAP5-10Q6L8G5 202 aa6.35□□□□□ -1.39
PPP1CB-206ENST00000427786 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
PPP1CB-206ENST00000427786 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
PPP1CB-206ENST00000427786 KRTAP20-2Q3LI61 65 aa6.3□□□□□ -1.4
PPP1CB-206ENST00000427786 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
PPP1CB-206ENST00000427786 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
PPP1CB-206ENST00000427786 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
PPP1CB-206ENST00000427786 A6NED7 52 aa6.21□□□□□ -1.42
PPP1CB-206ENST00000427786 SYNE1Q8NF91 8797 aaKnown RBP6.19□□□□□ -1.42
PPP1CB-206ENST00000427786 KRTAP5-3Q6L8H2 238 aa6.19□□□□□ -1.42
PPP1CB-206ENST00000427786 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
PPP1CB-206ENST00000427786 KRTAP12-4P60329 112 aa6.16□□□□□ -1.42
PPP1CB-206ENST00000427786 CDC42SE1Q9NRR8 79 aa6.13□□□□□ -1.43
PPP1CB-206ENST00000427786 KRTAP5-7Q6L8G8 165 aa6.1□□□□□ -1.43
PPP1CB-206ENST00000427786 SVIPQ8NHG7 77 aa6.09□□□□□ -1.43
PPP1CB-206ENST00000427786 ROMO1P60602 79 aa6.05□□□□□ -1.44
PPP1CB-206ENST00000427786 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
PPP1CB-206ENST00000427786 MT1AP04731 61 aa5.94□□□□□ -1.46
PPP1CB-206ENST00000427786 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
PPP1CB-206ENST00000427786 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
PPP1CB-206ENST00000427786 KRTAP5-2Q701N4 177 aa5.88□□□□□ -1.47
PPP1CB-206ENST00000427786 PCP4P48539 62 aa5.85□□□□□ -1.47
PPP1CB-206ENST00000427786 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
PPP1CB-206ENST00000427786 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
PPP1CB-206ENST00000427786 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
PPP1CB-206ENST00000427786 KRTAP5-8O75690 187 aa5.58□□□□□ -1.52
PPP1CB-206ENST00000427786 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
PPP1CB-206ENST00000427786 MT3P25713 68 aa5.4□□□□□ -1.54
PPP1CB-206ENST00000427786 MUC5BQ9HC84 5762 aaPredicted RBP5.39□□□□□ -1.55
PPP1CB-206ENST00000427786 AHNAKQ09666 5890 aaKnown RBP5.38□□□□□ -1.55
PPP1CB-206ENST00000427786 MUC5ACP98088 5654 aa5.36□□□□□ -1.55
PPP1CB-206ENST00000427786 KRTAP5-1Q6L8H4 278 aa5.27□□□□□ -1.57
PPP1CB-206ENST00000427786 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
PPP1CB-206ENST00000427786 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
PPP1CB-206ENST00000427786 LCE1EQ5T753 118 aa5□□□□□ -1.61
PPP1CB-206ENST00000427786 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
PPP1CB-206ENST00000427786 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
PPP1CB-206ENST00000427786 KRTAP4-12Q9BQ66 201 aa4.77□□□□□ -1.65
PPP1CB-206ENST00000427786 KRTAP4-2Q9BYR5 136 aa4.77□□□□□ -1.65
PPP1CB-206ENST00000427786 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
PPP1CB-206ENST00000427786 LCE1CQ5T751 118 aa4.65□□□□□ -1.67
PPP1CB-206ENST00000427786 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.67
PPP1CB-206ENST00000427786 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
PPP1CB-206ENST00000427786 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
PPP1CB-206ENST00000427786 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
PPP1CB-206ENST00000427786 H3BS24 57 aa4.24□□□□□ -1.73
PPP1CB-206ENST00000427786 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
PPP1CB-206ENST00000427786 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
PPP1CB-206ENST00000427786 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
PPP1CB-206ENST00000427786 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
PPP1CB-206ENST00000427786 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
PPP1CB-206ENST00000427786 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
PPP1CB-206ENST00000427786 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
PPP1CB-206ENST00000427786 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
PPP1CB-206ENST00000427786 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
PPP1CB-206ENST00000427786 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.88
PPP1CB-206ENST00000427786 PRM1P04553 51 aa3.09□□□□□ -1.91
PPP1CB-206ENST00000427786 INE1O15225 51 aa2.92□□□□□ -1.94
PPP1CB-206ENST00000427786 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
PPP1CB-206ENST00000427786 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 99.4 ms