RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 A0A1B0GU33 70 aa3.45□□□□□ -1.86
LINC00963-204ENST00000427778 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
LINC00963-204ENST00000427778 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
LINC00963-204ENST00000427778 CCDC179H3BU77 68 aa3.42□□□□□ -1.86
LINC00963-204ENST00000427778 SPATA8Q6RVD6 105 aa3.42□□□□□ -1.86
LINC00963-204ENST00000427778 A0A0D9SG42 100 aa3.4□□□□□ -1.87
LINC00963-204ENST00000427778 A0A1B0GU69 56 aa3.4□□□□□ -1.87
LINC00963-204ENST00000427778 KRTAP12-1P59990 96 aa3.39□□□□□ -1.87
LINC00963-204ENST00000427778 HMCN1Q96RW7 5635 aa3.36□□□□□ -1.87
LINC00963-204ENST00000427778 SMIM26A0A096LP01 95 aa3.36□□□□□ -1.87
LINC00963-204ENST00000427778 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
LINC00963-204ENST00000427778 SPINT4Q6UDR6 99 aa3.35□□□□□ -1.87
LINC00963-204ENST00000427778 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
LINC00963-204ENST00000427778 TMEM258P61165 79 aa3.34□□□□□ -1.87
LINC00963-204ENST00000427778 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
LINC00963-204ENST00000427778 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
LINC00963-204ENST00000427778 LINC01558Q9Y6Z2 57 aa3.31□□□□□ -1.88
LINC00963-204ENST00000427778 A8MU10 97 aa3.3□□□□□ -1.88
LINC00963-204ENST00000427778 MT1EP04732 61 aa3.29□□□□□ -1.88
LINC00963-204ENST00000427778 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
LINC00963-204ENST00000427778 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
LINC00963-204ENST00000427778 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
LINC00963-204ENST00000427778 UQCR11O14957 56 aa3.22□□□□□ -1.89
LINC00963-204ENST00000427778 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
LINC00963-204ENST00000427778 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
LINC00963-204ENST00000427778 TNP1P09430 55 aa3.21□□□□□ -1.9
LINC00963-204ENST00000427778 MT4P47944 62 aa3.21□□□□□ -1.9
LINC00963-204ENST00000427778 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
LINC00963-204ENST00000427778 MT1GP13640 62 aa3.19□□□□□ -1.9
LINC00963-204ENST00000427778 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
LINC00963-204ENST00000427778 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
LINC00963-204ENST00000427778 PCP4P48539 62 aa3.15□□□□□ -1.91
LINC00963-204ENST00000427778 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
LINC00963-204ENST00000427778 MT1LQ93083 61 aa3.15□□□□□ -1.91
LINC00963-204ENST00000427778 V9GYY9 64 aa3.15□□□□□ -1.91
LINC00963-204ENST00000427778 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
LINC00963-204ENST00000427778 Q1T7F1 81 aa3.13□□□□□ -1.91
LINC00963-204ENST00000427778 MT1MQ8N339 61 aa3.12□□□□□ -1.91
LINC00963-204ENST00000427778 PSPHP1O15172 72 aa3.08□□□□□ -1.92
LINC00963-204ENST00000427778 KRTAP25-1Q3LHN0 102 aa3.08□□□□□ -1.92
LINC00963-204ENST00000427778 K7ERS5 55 aa3.07□□□□□ -1.92
LINC00963-204ENST00000427778 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
LINC00963-204ENST00000427778 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
LINC00963-204ENST00000427778 RPS28P62857 69 aaKnown RBP3.01□□□□□ -1.93
LINC00963-204ENST00000427778 A6NED7 52 aa2.99□□□□□ -1.93
LINC00963-204ENST00000427778 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
LINC00963-204ENST00000427778 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
LINC00963-204ENST00000427778 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
LINC00963-204ENST00000427778 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
LINC00963-204ENST00000427778 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
LINC00963-204ENST00000427778 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
LINC00963-204ENST00000427778 ROMO1P60602 79 aa2.88□□□□□ -1.95
LINC00963-204ENST00000427778 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
LINC00963-204ENST00000427778 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
LINC00963-204ENST00000427778 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
LINC00963-204ENST00000427778 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
LINC00963-204ENST00000427778 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
LINC00963-204ENST00000427778 MT1AP04731 61 aa2.69□□□□□ -1.98
LINC00963-204ENST00000427778 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
LINC00963-204ENST00000427778 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
LINC00963-204ENST00000427778 LCE1CQ5T751 118 aa2.62□□□□□ -1.99
LINC00963-204ENST00000427778 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
LINC00963-204ENST00000427778 BRK1Q8WUW1 75 aa2.59□□□□□ -1.99
LINC00963-204ENST00000427778 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
LINC00963-204ENST00000427778 PRAC1Q96KF2 57 aa2.48□□□□□ -2.01
LINC00963-204ENST00000427778 PMAIP1Q13794 54 aa2.44□□□□□ -2.02
LINC00963-204ENST00000427778 PRO0628Q9UI54 55 aa2.31□□□□□ -2.04
LINC00963-204ENST00000427778 NDUFAF8A1L188 74 aa2.29□□□□□ -2.04
LINC00963-204ENST00000427778 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
LINC00963-204ENST00000427778 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
LINC00963-204ENST00000427778 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
LINC00963-204ENST00000427778 LUZP6Q538Z0 58 aa1.98□□□□□ -2.09
LINC00963-204ENST00000427778 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
LINC00963-204ENST00000427778 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
LINC00963-204ENST00000427778 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
LINC00963-204ENST00000427778 PRM1P04553 51 aa1.45□□□□□ -2.18
LINC00963-204ENST00000427778 INE1O15225 51 aa1.31□□□□□ -2.2
LINC00963-204ENST00000427778 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms