RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
HDAC6-206ENST00000426196 COX7CP15954 63 aa4.68□□□□□ -1.66
HDAC6-206ENST00000426196 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
HDAC6-206ENST00000426196 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
HDAC6-206ENST00000426196 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
HDAC6-206ENST00000426196 KRTAP19-4Q3LI73 84 aa4.65□□□□□ -1.67
HDAC6-206ENST00000426196 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
HDAC6-206ENST00000426196 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
HDAC6-206ENST00000426196 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
HDAC6-206ENST00000426196 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
HDAC6-206ENST00000426196 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
HDAC6-206ENST00000426196 TMEM258P61165 79 aa4.59□□□□□ -1.67
HDAC6-206ENST00000426196 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
HDAC6-206ENST00000426196 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
HDAC6-206ENST00000426196 ATP5EP56381 51 aaPredicted RBP4.53□□□□□ -1.68
HDAC6-206ENST00000426196 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
HDAC6-206ENST00000426196 TNP1P09430 55 aa4.5□□□□□ -1.69
HDAC6-206ENST00000426196 SPATA8Q6RVD6 105 aa4.5□□□□□ -1.69
HDAC6-206ENST00000426196 SPANXA2-OT1Q8N9U9 137 aa4.5□□□□□ -1.69
HDAC6-206ENST00000426196 PRO0628Q9UI54 55 aa4.49□□□□□ -1.69
HDAC6-206ENST00000426196 H7BZZ5 65 aa4.48□□□□□ -1.69
HDAC6-206ENST00000426196 SNURFQ9Y675 71 aa4.48□□□□□ -1.69
HDAC6-206ENST00000426196 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
HDAC6-206ENST00000426196 SERP1Q9Y6X1 66 aa4.47□□□□□ -1.69
HDAC6-206ENST00000426196 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
HDAC6-206ENST00000426196 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
HDAC6-206ENST00000426196 SEC61GP60059 68 aa4.43□□□□□ -1.7
HDAC6-206ENST00000426196 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
HDAC6-206ENST00000426196 A0A1B0GU33 70 aa4.37□□□□□ -1.71
HDAC6-206ENST00000426196 V9GYY9 64 aa4.36□□□□□ -1.71
HDAC6-206ENST00000426196 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.72
HDAC6-206ENST00000426196 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
HDAC6-206ENST00000426196 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
HDAC6-206ENST00000426196 COA5Q86WW8 74 aa4.26□□□□□ -1.73
HDAC6-206ENST00000426196 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
HDAC6-206ENST00000426196 MT1AP04731 61 aa4.22□□□□□ -1.73
HDAC6-206ENST00000426196 Q1T7F1 81 aa4.22□□□□□ -1.73
HDAC6-206ENST00000426196 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
HDAC6-206ENST00000426196 A8MU10 97 aa4.21□□□□□ -1.74
HDAC6-206ENST00000426196 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
HDAC6-206ENST00000426196 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
HDAC6-206ENST00000426196 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
HDAC6-206ENST00000426196 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
HDAC6-206ENST00000426196 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
HDAC6-206ENST00000426196 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
HDAC6-206ENST00000426196 A0A1B0GU69 56 aa4.07□□□□□ -1.76
HDAC6-206ENST00000426196 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
HDAC6-206ENST00000426196 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
HDAC6-206ENST00000426196 PSPHP1O15172 72 aa4.05□□□□□ -1.76
HDAC6-206ENST00000426196 LCE3CQ5T5A8 94 aa4.04□□□□□ -1.76
HDAC6-206ENST00000426196 UQCR11O14957 56 aa3.98□□□□□ -1.77
HDAC6-206ENST00000426196 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
HDAC6-206ENST00000426196 A6NED7 52 aa3.93□□□□□ -1.78
HDAC6-206ENST00000426196 MT3P25713 68 aa3.9□□□□□ -1.79
HDAC6-206ENST00000426196 MIR22HGQ0VDD5 57 aa3.89□□□□□ -1.79
HDAC6-206ENST00000426196 K7ERS5 55 aa3.82□□□□□ -1.8
HDAC6-206ENST00000426196 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
HDAC6-206ENST00000426196 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
HDAC6-206ENST00000426196 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
HDAC6-206ENST00000426196 LCE1EQ5T753 118 aa3.71□□□□□ -1.82
HDAC6-206ENST00000426196 ROMO1P60602 79 aa3.57□□□□□ -1.84
HDAC6-206ENST00000426196 LCE1BQ5T7P3 118 aa3.56□□□□□ -1.84
HDAC6-206ENST00000426196 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
HDAC6-206ENST00000426196 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
HDAC6-206ENST00000426196 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
HDAC6-206ENST00000426196 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
HDAC6-206ENST00000426196 PHGR1C9JFL3 82 aa3.22□□□□□ -1.89
HDAC6-206ENST00000426196 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
HDAC6-206ENST00000426196 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
HDAC6-206ENST00000426196 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
HDAC6-206ENST00000426196 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
HDAC6-206ENST00000426196 INE1O15225 51 aa2.76□□□□□ -1.97
HDAC6-206ENST00000426196 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
HDAC6-206ENST00000426196 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
HDAC6-206ENST00000426196 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
HDAC6-206ENST00000426196 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
HDAC6-206ENST00000426196 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
HDAC6-206ENST00000426196 PRM1P04553 51 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 207 ms