RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 LCE3AQ5TA76 89 aa6□□□□□ -1.45
HDAC7-208ENST00000425451 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
HDAC7-208ENST00000425451 KRTAP20-2Q3LI61 65 aa5.9□□□□□ -1.46
HDAC7-208ENST00000425451 ANAPC13Q9BS18 74 aa5.89□□□□□ -1.47
HDAC7-208ENST00000425451 A0A1B0GU69 56 aa5.86□□□□□ -1.47
HDAC7-208ENST00000425451 A8MU10 97 aa5.85□□□□□ -1.47
HDAC7-208ENST00000425451 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
HDAC7-208ENST00000425451 TNP1P09430 55 aa5.85□□□□□ -1.47
HDAC7-208ENST00000425451 KRTAP5-5Q701N2 237 aaPredicted RBP5.83□□□□□ -1.48
HDAC7-208ENST00000425451 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
HDAC7-208ENST00000425451 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
HDAC7-208ENST00000425451 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
HDAC7-208ENST00000425451 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
HDAC7-208ENST00000425451 ATP5EP56381 51 aaPredicted RBP5.66□□□□□ -1.5
HDAC7-208ENST00000425451 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.5
HDAC7-208ENST00000425451 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
HDAC7-208ENST00000425451 PRR15LQ9BU68 103 aa5.62□□□□□ -1.51
HDAC7-208ENST00000425451 TMEM258P61165 79 aa5.53□□□□□ -1.52
HDAC7-208ENST00000425451 SYNE1Q8NF91 8797 aaKnown RBP5.53□□□□□ -1.52
HDAC7-208ENST00000425451 KRTAP4-11Q9BYQ6 195 aa5.48□□□□□ -1.53
HDAC7-208ENST00000425451 UQCR11O14957 56 aa5.47□□□□□ -1.53
HDAC7-208ENST00000425451 KRTAP5-2Q701N4 177 aa5.39□□□□□ -1.55
HDAC7-208ENST00000425451 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
HDAC7-208ENST00000425451 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
HDAC7-208ENST00000425451 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
HDAC7-208ENST00000425451 KRTAP5-8O75690 187 aa5.31□□□□□ -1.56
HDAC7-208ENST00000425451 PSPHP1O15172 72 aa5.29□□□□□ -1.56
HDAC7-208ENST00000425451 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
HDAC7-208ENST00000425451 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
HDAC7-208ENST00000425451 MT1AP04731 61 aa5.27□□□□□ -1.57
HDAC7-208ENST00000425451 MUC5ACP98088 5654 aa5.25□□□□□ -1.57
HDAC7-208ENST00000425451 Q1T7F1 81 aa5.24□□□□□ -1.57
HDAC7-208ENST00000425451 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
HDAC7-208ENST00000425451 V9GYY9 64 aa5.2□□□□□ -1.58
HDAC7-208ENST00000425451 K7ERS5 55 aa5.19□□□□□ -1.58
HDAC7-208ENST00000425451 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
HDAC7-208ENST00000425451 MUC5BQ9HC84 5762 aaPredicted RBP5.19□□□□□ -1.58
HDAC7-208ENST00000425451 KRTAP9-4Q9BYQ2 154 aa5.15□□□□□ -1.59
HDAC7-208ENST00000425451 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
HDAC7-208ENST00000425451 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
HDAC7-208ENST00000425451 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
HDAC7-208ENST00000425451 A6NED7 52 aa5.06□□□□□ -1.6
HDAC7-208ENST00000425451 KRTAP9-9Q9BYP9 154 aa5.06□□□□□ -1.6
HDAC7-208ENST00000425451 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
HDAC7-208ENST00000425451 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
HDAC7-208ENST00000425451 RPS28P62857 69 aaKnown RBP4.92□□□□□ -1.62
HDAC7-208ENST00000425451 KRTAP5-1Q6L8H4 278 aa4.92□□□□□ -1.62
HDAC7-208ENST00000425451 ROMO1P60602 79 aa4.91□□□□□ -1.62
HDAC7-208ENST00000425451 MT3P25713 68 aa4.83□□□□□ -1.64
HDAC7-208ENST00000425451 PCP4P48539 62 aa4.82□□□□□ -1.64
HDAC7-208ENST00000425451 LCE1EQ5T753 118 aa4.55□□□□□ -1.68
HDAC7-208ENST00000425451 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
HDAC7-208ENST00000425451 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
HDAC7-208ENST00000425451 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
HDAC7-208ENST00000425451 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
HDAC7-208ENST00000425451 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
HDAC7-208ENST00000425451 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
HDAC7-208ENST00000425451 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
HDAC7-208ENST00000425451 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
HDAC7-208ENST00000425451 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
HDAC7-208ENST00000425451 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
HDAC7-208ENST00000425451 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
HDAC7-208ENST00000425451 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
HDAC7-208ENST00000425451 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
HDAC7-208ENST00000425451 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
HDAC7-208ENST00000425451 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
HDAC7-208ENST00000425451 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
HDAC7-208ENST00000425451 SVIPQ8NHG7 77 aa3.36□□□□□ -1.87
HDAC7-208ENST00000425451 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
HDAC7-208ENST00000425451 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
HDAC7-208ENST00000425451 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
HDAC7-208ENST00000425451 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
HDAC7-208ENST00000425451 NDUFAF8A1L188 74 aa2.57□□□□□ -2
HDAC7-208ENST00000425451 PRM1P04553 51 aa2.53□□□□□ -2
HDAC7-208ENST00000425451 MUC16Q8WXI7 14507 aa2.19□□□□□ -2.06
HDAC7-208ENST00000425451 INE1O15225 51 aa1.97□□□□□ -2.09
HDAC7-208ENST00000425451 A0A0A0MQY5 61 aa1.95□□□□□ -2.1
HDAC7-208ENST00000425451 H3BS24 57 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 76.2 ms