RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 LCE4AQ5TA78 99 aa7.46□□□□□ -1.21
CDCP1-202ENST00000425231 TMEM258P61165 79 aa7.44□□□□□ -1.22
CDCP1-202ENST00000425231 UQCR11O14957 56 aa7.42□□□□□ -1.22
CDCP1-202ENST00000425231 MT4P47944 62 aa7.38□□□□□ -1.23
CDCP1-202ENST00000425231 HMCN1Q96RW7 5635 aa7.37□□□□□ -1.23
CDCP1-202ENST00000425231 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
CDCP1-202ENST00000425231 KRTAP5-4Q6L8H1 288 aa7.35□□□□□ -1.23
CDCP1-202ENST00000425231 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
CDCP1-202ENST00000425231 MIR22HGQ0VDD5 57 aa7.24□□□□□ -1.25
CDCP1-202ENST00000425231 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
CDCP1-202ENST00000425231 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
CDCP1-202ENST00000425231 AHNAK2Q8IVF2 5795 aa7.1□□□□□ -1.27
CDCP1-202ENST00000425231 K7ERS5 55 aa7.08□□□□□ -1.28
CDCP1-202ENST00000425231 PSPHP1O15172 72 aa7.06□□□□□ -1.28
CDCP1-202ENST00000425231 V9GYY9 64 aa7.05□□□□□ -1.28
CDCP1-202ENST00000425231 KRTAP5-5Q701N2 237 aaPredicted RBP7.04□□□□□ -1.28
CDCP1-202ENST00000425231 Q1T7F1 81 aa7.03□□□□□ -1.28
CDCP1-202ENST00000425231 KRTAP5-10Q6L8G5 202 aa7□□□□□ -1.29
CDCP1-202ENST00000425231 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
CDCP1-202ENST00000425231 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
CDCP1-202ENST00000425231 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
CDCP1-202ENST00000425231 KRTAP20-2Q3LI61 65 aa6.93□□□□□ -1.3
CDCP1-202ENST00000425231 SPRR5A0A1B0GTR4 108 aa6.88□□□□□ -1.31
CDCP1-202ENST00000425231 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
CDCP1-202ENST00000425231 KRTAP12-4P60329 112 aa6.83□□□□□ -1.32
CDCP1-202ENST00000425231 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
CDCP1-202ENST00000425231 A6NED7 52 aa6.8□□□□□ -1.32
CDCP1-202ENST00000425231 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
CDCP1-202ENST00000425231 SYNE1Q8NF91 8797 aaKnown RBP6.78□□□□□ -1.32
CDCP1-202ENST00000425231 KRTAP5-7Q6L8G8 165 aa6.72□□□□□ -1.33
CDCP1-202ENST00000425231 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
CDCP1-202ENST00000425231 ROMO1P60602 79 aa6.62□□□□□ -1.35
CDCP1-202ENST00000425231 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
CDCP1-202ENST00000425231 MT1AP04731 61 aa6.51□□□□□ -1.37
CDCP1-202ENST00000425231 KRTAP6-1Q3LI64 71 aa6.5□□□□□ -1.37
CDCP1-202ENST00000425231 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
CDCP1-202ENST00000425231 KRTAP5-2Q701N4 177 aa6.42□□□□□ -1.38
CDCP1-202ENST00000425231 PCP4P48539 62 aa6.34□□□□□ -1.39
CDCP1-202ENST00000425231 KRTAP4-11Q9BYQ6 195 aa6.33□□□□□ -1.4
CDCP1-202ENST00000425231 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
CDCP1-202ENST00000425231 KRTAP6-2Q3LI66 62 aa6.21□□□□□ -1.42
CDCP1-202ENST00000425231 KRTAP5-8O75690 187 aa6.14□□□□□ -1.43
CDCP1-202ENST00000425231 OBSCNQ5VST9 7968 aa6.11□□□□□ -1.43
CDCP1-202ENST00000425231 MT3P25713 68 aa5.95□□□□□ -1.46
CDCP1-202ENST00000425231 MUC5ACP98088 5654 aa5.85□□□□□ -1.47
CDCP1-202ENST00000425231 MUC5BQ9HC84 5762 aaPredicted RBP5.84□□□□□ -1.47
CDCP1-202ENST00000425231 AHNAKQ09666 5890 aaKnown RBP5.81□□□□□ -1.48
CDCP1-202ENST00000425231 KRTAP9-9Q9BYP9 154 aa5.79□□□□□ -1.48
CDCP1-202ENST00000425231 KRTAP5-1Q6L8H4 278 aa5.78□□□□□ -1.48
CDCP1-202ENST00000425231 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
CDCP1-202ENST00000425231 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
CDCP1-202ENST00000425231 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
CDCP1-202ENST00000425231 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
CDCP1-202ENST00000425231 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
CDCP1-202ENST00000425231 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
CDCP1-202ENST00000425231 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
CDCP1-202ENST00000425231 LCE1BQ5T7P3 118 aa5.16□□□□□ -1.58
CDCP1-202ENST00000425231 LCE1CQ5T751 118 aa5.11□□□□□ -1.59
CDCP1-202ENST00000425231 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
CDCP1-202ENST00000425231 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
CDCP1-202ENST00000425231 KTN1-AS1Q86SY8 53 aa4.66□□□□□ -1.66
CDCP1-202ENST00000425231 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.66
CDCP1-202ENST00000425231 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
CDCP1-202ENST00000425231 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
CDCP1-202ENST00000425231 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
CDCP1-202ENST00000425231 H3BS24 57 aa4.44□□□□□ -1.7
CDCP1-202ENST00000425231 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
CDCP1-202ENST00000425231 KRTAP21-2Q3LI59 83 aa4.29□□□□□ -1.72
CDCP1-202ENST00000425231 PHGR1C9JFL3 82 aa4.05□□□□□ -1.76
CDCP1-202ENST00000425231 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
CDCP1-202ENST00000425231 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
CDCP1-202ENST00000425231 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
CDCP1-202ENST00000425231 PRM1P04553 51 aa3.38□□□□□ -1.87
CDCP1-202ENST00000425231 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
CDCP1-202ENST00000425231 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
CDCP1-202ENST00000425231 INE1O15225 51 aa2.82□□□□□ -1.96
CDCP1-202ENST00000425231 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms