RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SPATA8Q6RVD6 105 aa3.54□□□□□ -1.84
NUP50-206ENST00000422489 A0A1B0GU33 70 aa3.52□□□□□ -1.85
NUP50-206ENST00000422489 COX7CP15954 63 aa3.52□□□□□ -1.85
NUP50-206ENST00000422489 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
NUP50-206ENST00000422489 H7BZZ5 65 aa3.45□□□□□ -1.86
NUP50-206ENST00000422489 PSPHP1O15172 72 aa3.45□□□□□ -1.86
NUP50-206ENST00000422489 MT1EP04732 61 aa3.45□□□□□ -1.86
NUP50-206ENST00000422489 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
NUP50-206ENST00000422489 CYSTM1Q9H1C7 97 aa3.45□□□□□ -1.86
NUP50-206ENST00000422489 A0A1B0GU69 56 aa3.44□□□□□ -1.86
NUP50-206ENST00000422489 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
NUP50-206ENST00000422489 KRTAP19-5Q3LI72 72 aa3.41□□□□□ -1.86
NUP50-206ENST00000422489 A8MU10 97 aa3.4□□□□□ -1.87
NUP50-206ENST00000422489 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
NUP50-206ENST00000422489 MT1GP13640 62 aa3.36□□□□□ -1.87
NUP50-206ENST00000422489 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
NUP50-206ENST00000422489 ATP5EP56381 51 aaPredicted RBP3.34□□□□□ -1.87
NUP50-206ENST00000422489 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
NUP50-206ENST00000422489 TNP1P09430 55 aa3.32□□□□□ -1.88
NUP50-206ENST00000422489 PRR15LQ9BU68 103 aa3.32□□□□□ -1.88
NUP50-206ENST00000422489 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
NUP50-206ENST00000422489 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
NUP50-206ENST00000422489 MT1MQ8N339 61 aa3.29□□□□□ -1.88
NUP50-206ENST00000422489 MT1LQ93083 61 aa3.29□□□□□ -1.88
NUP50-206ENST00000422489 PRAC1Q96KF2 57 aa3.28□□□□□ -1.88
NUP50-206ENST00000422489 Q1T7F1 81 aa3.26□□□□□ -1.89
NUP50-206ENST00000422489 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
NUP50-206ENST00000422489 LINC01558Q9Y6Z2 57 aa3.25□□□□□ -1.89
NUP50-206ENST00000422489 MT4P47944 62 aa3.24□□□□□ -1.89
NUP50-206ENST00000422489 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
NUP50-206ENST00000422489 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
NUP50-206ENST00000422489 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
NUP50-206ENST00000422489 UQCR11O14957 56 aa3.2□□□□□ -1.9
NUP50-206ENST00000422489 MT3P25713 68 aa3.19□□□□□ -1.9
NUP50-206ENST00000422489 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
NUP50-206ENST00000422489 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
NUP50-206ENST00000422489 A6NED7 52 aa3.16□□□□□ -1.9
NUP50-206ENST00000422489 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
NUP50-206ENST00000422489 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
NUP50-206ENST00000422489 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
NUP50-206ENST00000422489 CDC42SE1Q9NRR8 79 aa3.12□□□□□ -1.91
NUP50-206ENST00000422489 ROMO1P60602 79 aa3.11□□□□□ -1.91
NUP50-206ENST00000422489 K7ERS5 55 aa3.1□□□□□ -1.91
NUP50-206ENST00000422489 KRTAP25-1Q3LHN0 102 aa3.09□□□□□ -1.91
NUP50-206ENST00000422489 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
NUP50-206ENST00000422489 KRTAP5-10Q6L8G5 202 aa3.01□□□□□ -1.93
NUP50-206ENST00000422489 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
NUP50-206ENST00000422489 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
NUP50-206ENST00000422489 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
NUP50-206ENST00000422489 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
NUP50-206ENST00000422489 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
NUP50-206ENST00000422489 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
NUP50-206ENST00000422489 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
NUP50-206ENST00000422489 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
NUP50-206ENST00000422489 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
NUP50-206ENST00000422489 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
NUP50-206ENST00000422489 MT1AP04731 61 aa2.8□□□□□ -1.96
NUP50-206ENST00000422489 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
NUP50-206ENST00000422489 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
NUP50-206ENST00000422489 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
NUP50-206ENST00000422489 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
NUP50-206ENST00000422489 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
NUP50-206ENST00000422489 LCE1FQ5T754 118 aa2.58□□□□□ -2
NUP50-206ENST00000422489 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
NUP50-206ENST00000422489 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
NUP50-206ENST00000422489 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
NUP50-206ENST00000422489 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
NUP50-206ENST00000422489 INE1O15225 51 aa2.44□□□□□ -2.02
NUP50-206ENST00000422489 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
NUP50-206ENST00000422489 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
NUP50-206ENST00000422489 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
NUP50-206ENST00000422489 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
NUP50-206ENST00000422489 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
NUP50-206ENST00000422489 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
NUP50-206ENST00000422489 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
NUP50-206ENST00000422489 PRM1P04553 51 aa1.46□□□□□ -2.18
NUP50-206ENST00000422489 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
NUP50-206ENST00000422489 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms