RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 GPR98Q8WXG9 6306 aa6.37□□□□□ -1.39
UBXN11-208ENST00000421827 KRTAP4-9Q9BYQ8 210 aa6.33□□□□□ -1.4
UBXN11-208ENST00000421827 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
UBXN11-208ENST00000421827 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
UBXN11-208ENST00000421827 KRTAP4-3Q9BYR4 195 aa6.24□□□□□ -1.41
UBXN11-208ENST00000421827 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
UBXN11-208ENST00000421827 V9GYY9 64 aa6.2□□□□□ -1.42
UBXN11-208ENST00000421827 LCE1DQ5T752 114 aa6.19□□□□□ -1.42
UBXN11-208ENST00000421827 K7ERS5 55 aa6.18□□□□□ -1.42
UBXN11-208ENST00000421827 PSPHP1O15172 72 aa6.17□□□□□ -1.42
UBXN11-208ENST00000421827 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
UBXN11-208ENST00000421827 Q1T7F1 81 aa6.15□□□□□ -1.42
UBXN11-208ENST00000421827 MT4P47944 62 aa6.12□□□□□ -1.43
UBXN11-208ENST00000421827 HMCN1Q96RW7 5635 aa6.12□□□□□ -1.43
UBXN11-208ENST00000421827 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
UBXN11-208ENST00000421827 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
UBXN11-208ENST00000421827 KRTAP5-4Q6L8H1 288 aa6.09□□□□□ -1.43
UBXN11-208ENST00000421827 A6NED7 52 aa5.97□□□□□ -1.45
UBXN11-208ENST00000421827 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
UBXN11-208ENST00000421827 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
UBXN11-208ENST00000421827 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
UBXN11-208ENST00000421827 AHNAK2Q8IVF2 5795 aa5.86□□□□□ -1.47
UBXN11-208ENST00000421827 KRTAP5-5Q701N2 237 aaPredicted RBP5.86□□□□□ -1.47
UBXN11-208ENST00000421827 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
UBXN11-208ENST00000421827 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
UBXN11-208ENST00000421827 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
UBXN11-208ENST00000421827 ROMO1P60602 79 aa5.75□□□□□ -1.49
UBXN11-208ENST00000421827 KRTAP20-2Q3LI61 65 aa5.75□□□□□ -1.49
UBXN11-208ENST00000421827 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
UBXN11-208ENST00000421827 KRTAP5-10Q6L8G5 202 aa5.74□□□□□ -1.49
UBXN11-208ENST00000421827 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
UBXN11-208ENST00000421827 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
UBXN11-208ENST00000421827 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
UBXN11-208ENST00000421827 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.51
UBXN11-208ENST00000421827 KRTAP5-7Q6L8G8 165 aa5.51□□□□□ -1.53
UBXN11-208ENST00000421827 MT1AP04731 61 aa5.48□□□□□ -1.53
UBXN11-208ENST00000421827 KRTAP6-1Q3LI64 71 aa5.44□□□□□ -1.54
UBXN11-208ENST00000421827 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
UBXN11-208ENST00000421827 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
UBXN11-208ENST00000421827 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
UBXN11-208ENST00000421827 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
UBXN11-208ENST00000421827 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
UBXN11-208ENST00000421827 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
UBXN11-208ENST00000421827 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
UBXN11-208ENST00000421827 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
UBXN11-208ENST00000421827 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
UBXN11-208ENST00000421827 KRTAP5-8O75690 187 aa5.06□□□□□ -1.6
UBXN11-208ENST00000421827 MT3P25713 68 aa5.02□□□□□ -1.61
UBXN11-208ENST00000421827 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
UBXN11-208ENST00000421827 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
UBXN11-208ENST00000421827 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
UBXN11-208ENST00000421827 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
UBXN11-208ENST00000421827 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
UBXN11-208ENST00000421827 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
UBXN11-208ENST00000421827 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
UBXN11-208ENST00000421827 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
UBXN11-208ENST00000421827 LCE1EQ5T753 118 aa4.59□□□□□ -1.67
UBXN11-208ENST00000421827 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
UBXN11-208ENST00000421827 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
UBXN11-208ENST00000421827 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
UBXN11-208ENST00000421827 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
UBXN11-208ENST00000421827 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
UBXN11-208ENST00000421827 KRTAP4-12Q9BQ66 201 aa3.92□□□□□ -1.78
UBXN11-208ENST00000421827 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
UBXN11-208ENST00000421827 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
UBXN11-208ENST00000421827 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
UBXN11-208ENST00000421827 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
UBXN11-208ENST00000421827 H3BS24 57 aa3.71□□□□□ -1.82
UBXN11-208ENST00000421827 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
UBXN11-208ENST00000421827 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
UBXN11-208ENST00000421827 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
UBXN11-208ENST00000421827 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
UBXN11-208ENST00000421827 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
UBXN11-208ENST00000421827 INE1O15225 51 aa3.05□□□□□ -1.92
UBXN11-208ENST00000421827 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
UBXN11-208ENST00000421827 PRM1P04553 51 aa2.93□□□□□ -1.94
UBXN11-208ENST00000421827 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
UBXN11-208ENST00000421827 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 90.1 ms