RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 PSPHP1O15172 72 aa7.7□□□□□ -1.18
CPNE1-211ENST00000420363 MT1GP13640 62 aa7.7□□□□□ -1.18
CPNE1-211ENST00000420363 PP632Q6XCG6 107 aa7.65□□□□□ -1.18
CPNE1-211ENST00000420363 K7ERS5 55 aa7.64□□□□□ -1.19
CPNE1-211ENST00000420363 MT1LQ93083 61 aa7.63□□□□□ -1.19
CPNE1-211ENST00000420363 MT1MQ8N339 61 aa7.56□□□□□ -1.2
CPNE1-211ENST00000420363 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
CPNE1-211ENST00000420363 LCE1DQ5T752 114 aa7.53□□□□□ -1.2
CPNE1-211ENST00000420363 PCP4P48539 62 aa7.5□□□□□ -1.21
CPNE1-211ENST00000420363 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
CPNE1-211ENST00000420363 KRTAP12-3P60328 96 aa7.48□□□□□ -1.21
CPNE1-211ENST00000420363 A6NED7 52 aa7.47□□□□□ -1.21
CPNE1-211ENST00000420363 LCE4AQ5TA78 99 aa7.44□□□□□ -1.22
CPNE1-211ENST00000420363 MT4P47944 62 aa7.43□□□□□ -1.22
CPNE1-211ENST00000420363 HMCN1Q96RW7 5635 aa7.41□□□□□ -1.22
CPNE1-211ENST00000420363 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
CPNE1-211ENST00000420363 KRTAP4-3Q9BYR4 195 aa7.29□□□□□ -1.24
CPNE1-211ENST00000420363 CDC42SE1Q9NRR8 79 aa7.26□□□□□ -1.25
CPNE1-211ENST00000420363 AHNAK2Q8IVF2 5795 aa7.25□□□□□ -1.25
CPNE1-211ENST00000420363 KRTAP5-4Q6L8H1 288 aa7.22□□□□□ -1.25
CPNE1-211ENST00000420363 KRTAP4-7Q9BYR0 210 aa7.19□□□□□ -1.26
CPNE1-211ENST00000420363 KRTAP19-4Q3LI73 84 aa7.18□□□□□ -1.26
CPNE1-211ENST00000420363 KRTAP5-10Q6L8G5 202 aa7.16□□□□□ -1.26
CPNE1-211ENST00000420363 KRTAP4-6Q9BYQ5 205 aa7.16□□□□□ -1.26
CPNE1-211ENST00000420363 ROMO1P60602 79 aa7.13□□□□□ -1.27
CPNE1-211ENST00000420363 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
CPNE1-211ENST00000420363 KRTAP5-5Q701N2 237 aaPredicted RBP6.95□□□□□ -1.3
CPNE1-211ENST00000420363 KRTAP5-7Q6L8G8 165 aa6.93□□□□□ -1.3
CPNE1-211ENST00000420363 KRTAP5-3Q6L8H2 238 aa6.92□□□□□ -1.3
CPNE1-211ENST00000420363 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.3
CPNE1-211ENST00000420363 KRTAP20-2Q3LI61 65 aa6.84□□□□□ -1.31
CPNE1-211ENST00000420363 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
CPNE1-211ENST00000420363 SPRR5A0A1B0GTR4 108 aa6.79□□□□□ -1.32
CPNE1-211ENST00000420363 KRTAP12-4P60329 112 aa6.75□□□□□ -1.33
CPNE1-211ENST00000420363 SYNE1Q8NF91 8797 aaKnown RBP6.61□□□□□ -1.35
CPNE1-211ENST00000420363 BRK1Q8WUW1 75 aa6.57□□□□□ -1.36
CPNE1-211ENST00000420363 MT1AP04731 61 aa6.51□□□□□ -1.37
CPNE1-211ENST00000420363 KRTAP9-6A8MVA2 160 aa6.49□□□□□ -1.37
CPNE1-211ENST00000420363 KRTAP6-1Q3LI64 71 aa6.42□□□□□ -1.38
CPNE1-211ENST00000420363 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
CPNE1-211ENST00000420363 KRTAP5-2Q701N4 177 aa6.3□□□□□ -1.4
CPNE1-211ENST00000420363 KRTAP9-4Q9BYQ2 154 aa6.24□□□□□ -1.41
CPNE1-211ENST00000420363 PMAIP1Q13794 54 aa6.18□□□□□ -1.42
CPNE1-211ENST00000420363 KRTAP5-8O75690 187 aa6.12□□□□□ -1.43
CPNE1-211ENST00000420363 KRTAP6-2Q3LI66 62 aa6.1□□□□□ -1.43
CPNE1-211ENST00000420363 OBSCNQ5VST9 7968 aa6.08□□□□□ -1.44
CPNE1-211ENST00000420363 AHNAKQ09666 5890 aaKnown RBP6.05□□□□□ -1.44
CPNE1-211ENST00000420363 MUC5BQ9HC84 5762 aaPredicted RBP6.03□□□□□ -1.44
CPNE1-211ENST00000420363 MUC5ACP98088 5654 aa6.01□□□□□ -1.45
CPNE1-211ENST00000420363 MT3P25713 68 aa5.94□□□□□ -1.46
CPNE1-211ENST00000420363 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
CPNE1-211ENST00000420363 PRAC1Q96KF2 57 aa5.9□□□□□ -1.46
CPNE1-211ENST00000420363 PRO0628Q9UI54 55 aa5.86□□□□□ -1.47
CPNE1-211ENST00000420363 KRTAP5-1Q6L8H4 278 aa5.67□□□□□ -1.5
CPNE1-211ENST00000420363 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
CPNE1-211ENST00000420363 LCE1EQ5T753 118 aa5.45□□□□□ -1.54
CPNE1-211ENST00000420363 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
CPNE1-211ENST00000420363 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
CPNE1-211ENST00000420363 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
CPNE1-211ENST00000420363 LCE1CQ5T751 118 aa5.05□□□□□ -1.6
CPNE1-211ENST00000420363 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
CPNE1-211ENST00000420363 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
CPNE1-211ENST00000420363 LCE3EQ5T5B0 92 aa4.74□□□□□ -1.65
CPNE1-211ENST00000420363 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
CPNE1-211ENST00000420363 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.67
CPNE1-211ENST00000420363 KRTAP5-11Q6L8G4 156 aa4.58□□□□□ -1.68
CPNE1-211ENST00000420363 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
CPNE1-211ENST00000420363 H3BS24 57 aa4.27□□□□□ -1.73
CPNE1-211ENST00000420363 KRTAP21-2Q3LI59 83 aa4.25□□□□□ -1.73
CPNE1-211ENST00000420363 PHGR1C9JFL3 82 aa4.21□□□□□ -1.74
CPNE1-211ENST00000420363 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
CPNE1-211ENST00000420363 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
CPNE1-211ENST00000420363 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
CPNE1-211ENST00000420363 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
CPNE1-211ENST00000420363 PRM1P04553 51 aa3.64□□□□□ -1.83
CPNE1-211ENST00000420363 INE1O15225 51 aa3.36□□□□□ -1.87
CPNE1-211ENST00000420363 KRTAP21-1Q3LI58 79 aa3.2□□□□□ -1.9
CPNE1-211ENST00000420363 MUC16Q8WXI7 14507 aa2.59□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 14.4 ms