RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 SPINT4Q6UDR6 99 aa4.78□□□□□ -1.64
NFE4-201ENST00000420058 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
NFE4-201ENST00000420058 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
NFE4-201ENST00000420058 SYNE1Q8NF91 8797 aaKnown RBP4.75□□□□□ -1.65
NFE4-201ENST00000420058 SNURFQ9Y675 71 aa4.72□□□□□ -1.65
NFE4-201ENST00000420058 SPANXA2-OT1Q8N9U9 137 aa4.71□□□□□ -1.66
NFE4-201ENST00000420058 SMIM20Q8N5G0 67 aa4.67□□□□□ -1.66
NFE4-201ENST00000420058 A0A1B0GU33 70 aa4.64□□□□□ -1.67
NFE4-201ENST00000420058 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
NFE4-201ENST00000420058 A0A1B0GV90 55 aa4.62□□□□□ -1.67
NFE4-201ENST00000420058 J3QR89 54 aa4.61□□□□□ -1.67
NFE4-201ENST00000420058 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
NFE4-201ENST00000420058 COA5Q86WW8 74 aa4.6□□□□□ -1.67
NFE4-201ENST00000420058 TNP1P09430 55 aa4.59□□□□□ -1.67
NFE4-201ENST00000420058 SEC61GP60059 68 aa4.59□□□□□ -1.67
NFE4-201ENST00000420058 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
NFE4-201ENST00000420058 AHNAKQ09666 5890 aaKnown RBP4.56□□□□□ -1.68
NFE4-201ENST00000420058 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
NFE4-201ENST00000420058 A8MU10 97 aa4.53□□□□□ -1.68
NFE4-201ENST00000420058 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
NFE4-201ENST00000420058 SMIM26A0A096LP01 95 aa4.47□□□□□ -1.69
NFE4-201ENST00000420058 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
NFE4-201ENST00000420058 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
NFE4-201ENST00000420058 SERP2Q8N6R1 65 aa4.42□□□□□ -1.7
NFE4-201ENST00000420058 KRTAP5-8O75690 187 aa4.4□□□□□ -1.71
NFE4-201ENST00000420058 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
NFE4-201ENST00000420058 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
NFE4-201ENST00000420058 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
NFE4-201ENST00000420058 A0A1B0GU69 56 aa4.33□□□□□ -1.72
NFE4-201ENST00000420058 MT3P25713 68 aa4.31□□□□□ -1.72
NFE4-201ENST00000420058 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
NFE4-201ENST00000420058 PCP4P48539 62 aa4.27□□□□□ -1.73
NFE4-201ENST00000420058 K7ERU9 68 aa4.26□□□□□ -1.73
NFE4-201ENST00000420058 MT1AP04731 61 aa4.25□□□□□ -1.73
NFE4-201ENST00000420058 H7BZZ5 65 aa4.24□□□□□ -1.73
NFE4-201ENST00000420058 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
NFE4-201ENST00000420058 COX7CP15954 63 aa4.16□□□□□ -1.74
NFE4-201ENST00000420058 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
NFE4-201ENST00000420058 KRTAP25-1Q3LHN0 102 aa4.13□□□□□ -1.75
NFE4-201ENST00000420058 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
NFE4-201ENST00000420058 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
NFE4-201ENST00000420058 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
NFE4-201ENST00000420058 PRR15LQ9BU68 103 aa4.02□□□□□ -1.77
NFE4-201ENST00000420058 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
NFE4-201ENST00000420058 UQCR11O14957 56 aa3.93□□□□□ -1.78
NFE4-201ENST00000420058 MIR22HGQ0VDD5 57 aa3.81□□□□□ -1.8
NFE4-201ENST00000420058 CCDC179H3BU77 68 aa3.76□□□□□ -1.81
NFE4-201ENST00000420058 K7ERS5 55 aa3.73□□□□□ -1.81
NFE4-201ENST00000420058 ATP5EP56381 51 aaPredicted RBP3.73□□□□□ -1.81
NFE4-201ENST00000420058 ANAPC13Q9BS18 74 aa3.73□□□□□ -1.81
NFE4-201ENST00000420058 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
NFE4-201ENST00000420058 RPS28P62857 69 aaKnown RBP3.6□□□□□ -1.83
NFE4-201ENST00000420058 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
NFE4-201ENST00000420058 Q1T7F1 81 aa3.57□□□□□ -1.84
NFE4-201ENST00000420058 PSPHP1O15172 72 aa3.52□□□□□ -1.85
NFE4-201ENST00000420058 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
NFE4-201ENST00000420058 TMEM258P61165 79 aa3.5□□□□□ -1.85
NFE4-201ENST00000420058 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
NFE4-201ENST00000420058 ROMO1P60602 79 aa3.48□□□□□ -1.85
NFE4-201ENST00000420058 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
NFE4-201ENST00000420058 PRAC1Q96KF2 57 aa3.4□□□□□ -1.87
NFE4-201ENST00000420058 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
NFE4-201ENST00000420058 V9GYY9 64 aa3.38□□□□□ -1.87
NFE4-201ENST00000420058 A6NED7 52 aa3.32□□□□□ -1.88
NFE4-201ENST00000420058 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
NFE4-201ENST00000420058 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
NFE4-201ENST00000420058 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
NFE4-201ENST00000420058 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
NFE4-201ENST00000420058 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
NFE4-201ENST00000420058 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
NFE4-201ENST00000420058 BRK1Q8WUW1 75 aa2.31□□□□□ -2.04
NFE4-201ENST00000420058 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
NFE4-201ENST00000420058 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
NFE4-201ENST00000420058 PMAIP1Q13794 54 aa2.15□□□□□ -2.07
NFE4-201ENST00000420058 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
NFE4-201ENST00000420058 PRM1P04553 51 aa1.77□□□□□ -2.13
NFE4-201ENST00000420058 KTN1-AS1Q86SY8 53 aa1.72□□□□□ -2.13
NFE4-201ENST00000420058 INE1O15225 51 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 80.4 ms