RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 CAMK2N1Q7Z7J9 78 aa3.61□□□□□ -1.83
NUP50-205ENST00000419387 PCP4P48539 62 aa3.6□□□□□ -1.83
NUP50-205ENST00000419387 A0A0D9SG42 100 aa3.59□□□□□ -1.83
NUP50-205ENST00000419387 A8MU10 97 aa3.57□□□□□ -1.84
NUP50-205ENST00000419387 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
NUP50-205ENST00000419387 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
NUP50-205ENST00000419387 Q1T7F1 81 aa3.53□□□□□ -1.84
NUP50-205ENST00000419387 MT1EP04732 61 aa3.52□□□□□ -1.85
NUP50-205ENST00000419387 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
NUP50-205ENST00000419387 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
NUP50-205ENST00000419387 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
NUP50-205ENST00000419387 SPINT4Q6UDR6 99 aa3.51□□□□□ -1.85
NUP50-205ENST00000419387 SVIPQ8NHG7 77 aa3.51□□□□□ -1.85
NUP50-205ENST00000419387 RPS28P62857 69 aaKnown RBP3.5□□□□□ -1.85
NUP50-205ENST00000419387 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
NUP50-205ENST00000419387 DSTQ03001 7570 aaKnown RBP3.48□□□□□ -1.85
NUP50-205ENST00000419387 UQCR11O14957 56 aa3.47□□□□□ -1.85
NUP50-205ENST00000419387 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
NUP50-205ENST00000419387 PSPHP1O15172 72 aa3.46□□□□□ -1.86
NUP50-205ENST00000419387 MT3P25713 68 aa3.45□□□□□ -1.86
NUP50-205ENST00000419387 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
NUP50-205ENST00000419387 V9GYY9 64 aa3.45□□□□□ -1.86
NUP50-205ENST00000419387 MT1GP13640 62 aa3.43□□□□□ -1.86
NUP50-205ENST00000419387 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
NUP50-205ENST00000419387 MIR22HGQ0VDD5 57 aa3.41□□□□□ -1.86
NUP50-205ENST00000419387 PP632Q6XCG6 107 aa3.39□□□□□ -1.87
NUP50-205ENST00000419387 MT1MQ8N339 61 aa3.35□□□□□ -1.87
NUP50-205ENST00000419387 MT1LQ93083 61 aa3.35□□□□□ -1.87
NUP50-205ENST00000419387 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
NUP50-205ENST00000419387 TNP1P09430 55 aa3.32□□□□□ -1.88
NUP50-205ENST00000419387 LCE3AQ5TA76 89 aa3.32□□□□□ -1.88
NUP50-205ENST00000419387 A6NED7 52 aa3.3□□□□□ -1.88
NUP50-205ENST00000419387 MT4P47944 62 aa3.29□□□□□ -1.88
NUP50-205ENST00000419387 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
NUP50-205ENST00000419387 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
NUP50-205ENST00000419387 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
NUP50-205ENST00000419387 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
NUP50-205ENST00000419387 K7ERS5 55 aa3.21□□□□□ -1.9
NUP50-205ENST00000419387 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
NUP50-205ENST00000419387 KRTAP12-3P60328 96 aa3.19□□□□□ -1.9
NUP50-205ENST00000419387 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
NUP50-205ENST00000419387 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
NUP50-205ENST00000419387 ROMO1P60602 79 aa3.12□□□□□ -1.91
NUP50-205ENST00000419387 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
NUP50-205ENST00000419387 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
NUP50-205ENST00000419387 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
NUP50-205ENST00000419387 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
NUP50-205ENST00000419387 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
NUP50-205ENST00000419387 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
NUP50-205ENST00000419387 SYNE1Q8NF91 8797 aaKnown RBP2.99□□□□□ -1.93
NUP50-205ENST00000419387 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
NUP50-205ENST00000419387 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
NUP50-205ENST00000419387 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
NUP50-205ENST00000419387 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
NUP50-205ENST00000419387 MT1AP04731 61 aa2.85□□□□□ -1.95
NUP50-205ENST00000419387 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
NUP50-205ENST00000419387 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
NUP50-205ENST00000419387 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
NUP50-205ENST00000419387 PRAC1Q96KF2 57 aa2.75□□□□□ -1.97
NUP50-205ENST00000419387 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
NUP50-205ENST00000419387 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
NUP50-205ENST00000419387 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
NUP50-205ENST00000419387 MUC5BQ9HC84 5762 aaPredicted RBP2.68□□□□□ -1.98
NUP50-205ENST00000419387 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
NUP50-205ENST00000419387 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
NUP50-205ENST00000419387 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
NUP50-205ENST00000419387 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
NUP50-205ENST00000419387 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
NUP50-205ENST00000419387 NDUFAF8A1L188 74 aa2.27□□□□□ -2.05
NUP50-205ENST00000419387 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
NUP50-205ENST00000419387 LCE3DQ9BYE3 92 aa2.14□□□□□ -2.07
NUP50-205ENST00000419387 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
NUP50-205ENST00000419387 KRTAP21-2Q3LI59 83 aa1.87□□□□□ -2.11
NUP50-205ENST00000419387 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
NUP50-205ENST00000419387 PRM1P04553 51 aa1.62□□□□□ -2.15
NUP50-205ENST00000419387 INE1O15225 51 aa1.58□□□□□ -2.16
NUP50-205ENST00000419387 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
NUP50-205ENST00000419387 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 99.9 ms