RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 A0A1B0GU69 56 aa5.02□□□□□ -1.61
LINC01006-202ENST00000418309 H7BZZ5 65 aa5.02□□□□□ -1.61
LINC01006-202ENST00000418309 GPR98Q8WXG9 6306 aa5.02□□□□□ -1.61
LINC01006-202ENST00000418309 MT4P47944 62 aa5.01□□□□□ -1.61
LINC01006-202ENST00000418309 MT1LQ93083 61 aa5.01□□□□□ -1.61
LINC01006-202ENST00000418309 A8MU10 97 aa4.98□□□□□ -1.61
LINC01006-202ENST00000418309 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
LINC01006-202ENST00000418309 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
LINC01006-202ENST00000418309 TNP1P09430 55 aa4.96□□□□□ -1.62
LINC01006-202ENST00000418309 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
LINC01006-202ENST00000418309 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.62
LINC01006-202ENST00000418309 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
LINC01006-202ENST00000418309 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
LINC01006-202ENST00000418309 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
LINC01006-202ENST00000418309 PRR15LQ9BU68 103 aa4.83□□□□□ -1.64
LINC01006-202ENST00000418309 ANAPC13Q9BS18 74 aa4.8□□□□□ -1.64
LINC01006-202ENST00000418309 KRTAP12-3P60328 96 aa4.77□□□□□ -1.65
LINC01006-202ENST00000418309 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
LINC01006-202ENST00000418309 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
LINC01006-202ENST00000418309 AHNAK2Q8IVF2 5795 aa4.73□□□□□ -1.65
LINC01006-202ENST00000418309 CCDC179H3BU77 68 aa4.71□□□□□ -1.66
LINC01006-202ENST00000418309 LINC01558Q9Y6Z2 57 aa4.71□□□□□ -1.66
LINC01006-202ENST00000418309 ATP5EP56381 51 aaPredicted RBP4.7□□□□□ -1.66
LINC01006-202ENST00000418309 UQCR11O14957 56 aa4.65□□□□□ -1.67
LINC01006-202ENST00000418309 PCP4P48539 62 aa4.64□□□□□ -1.67
LINC01006-202ENST00000418309 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
LINC01006-202ENST00000418309 KRTAP5-7Q6L8G8 165 aa4.59□□□□□ -1.67
LINC01006-202ENST00000418309 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
LINC01006-202ENST00000418309 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
LINC01006-202ENST00000418309 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
LINC01006-202ENST00000418309 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
LINC01006-202ENST00000418309 MT3P25713 68 aa4.55□□□□□ -1.68
LINC01006-202ENST00000418309 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
LINC01006-202ENST00000418309 K7ERS5 55 aa4.51□□□□□ -1.69
LINC01006-202ENST00000418309 TMEM258P61165 79 aa4.51□□□□□ -1.69
LINC01006-202ENST00000418309 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
LINC01006-202ENST00000418309 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
LINC01006-202ENST00000418309 PSPHP1O15172 72 aa4.36□□□□□ -1.71
LINC01006-202ENST00000418309 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
LINC01006-202ENST00000418309 V9GYY9 64 aa4.33□□□□□ -1.72
LINC01006-202ENST00000418309 MT1AP04731 61 aa4.26□□□□□ -1.73
LINC01006-202ENST00000418309 Q1T7F1 81 aa4.26□□□□□ -1.73
LINC01006-202ENST00000418309 KRTAP6-1Q3LI64 71 aa4.25□□□□□ -1.73
LINC01006-202ENST00000418309 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
LINC01006-202ENST00000418309 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
LINC01006-202ENST00000418309 A6NED7 52 aa4.21□□□□□ -1.74
LINC01006-202ENST00000418309 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
LINC01006-202ENST00000418309 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
LINC01006-202ENST00000418309 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
LINC01006-202ENST00000418309 ROMO1P60602 79 aa4.13□□□□□ -1.75
LINC01006-202ENST00000418309 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
LINC01006-202ENST00000418309 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
LINC01006-202ENST00000418309 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
LINC01006-202ENST00000418309 SVIPQ8NHG7 77 aa3.98□□□□□ -1.77
LINC01006-202ENST00000418309 OBSCNQ5VST9 7968 aa3.97□□□□□ -1.77
LINC01006-202ENST00000418309 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
LINC01006-202ENST00000418309 MUC5ACP98088 5654 aa3.9□□□□□ -1.78
LINC01006-202ENST00000418309 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
LINC01006-202ENST00000418309 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
LINC01006-202ENST00000418309 PRO0628Q9UI54 55 aa3.76□□□□□ -1.81
LINC01006-202ENST00000418309 BRK1Q8WUW1 75 aa3.71□□□□□ -1.82
LINC01006-202ENST00000418309 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
LINC01006-202ENST00000418309 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
LINC01006-202ENST00000418309 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
LINC01006-202ENST00000418309 KTN1-AS1Q86SY8 53 aa3.45□□□□□ -1.86
LINC01006-202ENST00000418309 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
LINC01006-202ENST00000418309 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
LINC01006-202ENST00000418309 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
LINC01006-202ENST00000418309 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
LINC01006-202ENST00000418309 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
LINC01006-202ENST00000418309 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
LINC01006-202ENST00000418309 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
LINC01006-202ENST00000418309 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
LINC01006-202ENST00000418309 INE1O15225 51 aa2.3□□□□□ -2.04
LINC01006-202ENST00000418309 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
LINC01006-202ENST00000418309 PRM1P04553 51 aa2.11□□□□□ -2.07
LINC01006-202ENST00000418309 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms