RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 KRTAP5-4Q6L8H1 288 aa6.35□□□□□ -1.39
VPS16-204ENST00000417508 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
VPS16-204ENST00000417508 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
VPS16-204ENST00000417508 HMCN1Q96RW7 5635 aa6.32□□□□□ -1.4
VPS16-204ENST00000417508 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
VPS16-204ENST00000417508 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
VPS16-204ENST00000417508 UQCR11O14957 56 aa6.23□□□□□ -1.41
VPS16-204ENST00000417508 KRTAP4-6Q9BYQ5 205 aa6.2□□□□□ -1.42
VPS16-204ENST00000417508 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
VPS16-204ENST00000417508 TMEM258P61165 79 aa6.12□□□□□ -1.43
VPS16-204ENST00000417508 AHNAK2Q8IVF2 5795 aa6.12□□□□□ -1.43
VPS16-204ENST00000417508 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
VPS16-204ENST00000417508 KRTAP5-10Q6L8G5 202 aa6.11□□□□□ -1.43
VPS16-204ENST00000417508 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
VPS16-204ENST00000417508 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
VPS16-204ENST00000417508 K7ERS5 55 aa6.02□□□□□ -1.45
VPS16-204ENST00000417508 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
VPS16-204ENST00000417508 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
VPS16-204ENST00000417508 KRTAP20-2Q3LI61 65 aa5.98□□□□□ -1.45
VPS16-204ENST00000417508 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
VPS16-204ENST00000417508 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
VPS16-204ENST00000417508 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
VPS16-204ENST00000417508 KRTAP5-7Q6L8G8 165 aa5.92□□□□□ -1.46
VPS16-204ENST00000417508 V9GYY9 64 aa5.9□□□□□ -1.46
VPS16-204ENST00000417508 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
VPS16-204ENST00000417508 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
VPS16-204ENST00000417508 PCP4P48539 62 aa5.82□□□□□ -1.48
VPS16-204ENST00000417508 PSPHP1O15172 72 aa5.81□□□□□ -1.48
VPS16-204ENST00000417508 Q1T7F1 81 aa5.81□□□□□ -1.48
VPS16-204ENST00000417508 LCE3CQ5T5A8 94 aa5.76□□□□□ -1.49
VPS16-204ENST00000417508 SYNE1Q8NF91 8797 aaKnown RBP5.73□□□□□ -1.49
VPS16-204ENST00000417508 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.5
VPS16-204ENST00000417508 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
VPS16-204ENST00000417508 A6NED7 52 aa5.62□□□□□ -1.51
VPS16-204ENST00000417508 MT1AP04731 61 aa5.58□□□□□ -1.52
VPS16-204ENST00000417508 ROMO1P60602 79 aa5.53□□□□□ -1.52
VPS16-204ENST00000417508 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
VPS16-204ENST00000417508 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
VPS16-204ENST00000417508 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
VPS16-204ENST00000417508 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
VPS16-204ENST00000417508 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
VPS16-204ENST00000417508 KRTAP5-8O75690 187 aa5.31□□□□□ -1.56
VPS16-204ENST00000417508 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
VPS16-204ENST00000417508 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
VPS16-204ENST00000417508 MT3P25713 68 aa5.14□□□□□ -1.59
VPS16-204ENST00000417508 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
VPS16-204ENST00000417508 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
VPS16-204ENST00000417508 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
VPS16-204ENST00000417508 AHNAKQ09666 5890 aaKnown RBP5.07□□□□□ -1.6
VPS16-204ENST00000417508 KRTAP5-1Q6L8H4 278 aa4.98□□□□□ -1.61
VPS16-204ENST00000417508 BRK1Q8WUW1 75 aa4.97□□□□□ -1.61
VPS16-204ENST00000417508 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
VPS16-204ENST00000417508 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
VPS16-204ENST00000417508 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
VPS16-204ENST00000417508 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
VPS16-204ENST00000417508 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
VPS16-204ENST00000417508 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
VPS16-204ENST00000417508 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
VPS16-204ENST00000417508 PRAC1Q96KF2 57 aa4.35□□□□□ -1.71
VPS16-204ENST00000417508 SVIPQ8NHG7 77 aa4.15□□□□□ -1.75
VPS16-204ENST00000417508 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
VPS16-204ENST00000417508 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
VPS16-204ENST00000417508 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
VPS16-204ENST00000417508 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
VPS16-204ENST00000417508 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
VPS16-204ENST00000417508 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
VPS16-204ENST00000417508 LUZP6Q538Z0 58 aa3.82□□□□□ -1.8
VPS16-204ENST00000417508 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
VPS16-204ENST00000417508 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
VPS16-204ENST00000417508 KRTAP4-4Q9BYR3 166 aa3.32□□□□□ -1.88
VPS16-204ENST00000417508 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
VPS16-204ENST00000417508 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
VPS16-204ENST00000417508 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
VPS16-204ENST00000417508 INE1O15225 51 aa2.8□□□□□ -1.96
VPS16-204ENST00000417508 PRM1P04553 51 aa2.78□□□□□ -1.96
VPS16-204ENST00000417508 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
VPS16-204ENST00000417508 H3BS24 57 aa2.62□□□□□ -1.99
VPS16-204ENST00000417508 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 91.6 ms