RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 LCE3AQ5TA76 89 aa5.61□□□□□ -1.51
ITGB1-204ENST00000417122 PP632Q6XCG6 107 aa5.59□□□□□ -1.51
ITGB1-204ENST00000417122 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
ITGB1-204ENST00000417122 MT1LQ93083 61 aa5.56□□□□□ -1.52
ITGB1-204ENST00000417122 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
ITGB1-204ENST00000417122 UQCR11O14957 56 aa5.55□□□□□ -1.52
ITGB1-204ENST00000417122 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
ITGB1-204ENST00000417122 MT1MQ8N339 61 aa5.54□□□□□ -1.52
ITGB1-204ENST00000417122 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
ITGB1-204ENST00000417122 KRTAP4-2Q9BYR5 136 aa5.44□□□□□ -1.54
ITGB1-204ENST00000417122 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
ITGB1-204ENST00000417122 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
ITGB1-204ENST00000417122 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
ITGB1-204ENST00000417122 H3BS24 57 aa5.37□□□□□ -1.55
ITGB1-204ENST00000417122 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
ITGB1-204ENST00000417122 V9GYY9 64 aa5.35□□□□□ -1.55
ITGB1-204ENST00000417122 K7ERS5 55 aa5.33□□□□□ -1.56
ITGB1-204ENST00000417122 PSPHP1O15172 72 aa5.33□□□□□ -1.56
ITGB1-204ENST00000417122 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
ITGB1-204ENST00000417122 MT4P47944 62 aa5.31□□□□□ -1.56
ITGB1-204ENST00000417122 Q1T7F1 81 aa5.3□□□□□ -1.56
ITGB1-204ENST00000417122 KRTAP5-4Q6L8H1 288 aa5.27□□□□□ -1.57
ITGB1-204ENST00000417122 HMCN1Q96RW7 5635 aa5.2□□□□□ -1.58
ITGB1-204ENST00000417122 GPR98Q8WXG9 6306 aa5.15□□□□□ -1.59
ITGB1-204ENST00000417122 A6NED7 52 aa5.14□□□□□ -1.59
ITGB1-204ENST00000417122 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
ITGB1-204ENST00000417122 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
ITGB1-204ENST00000417122 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
ITGB1-204ENST00000417122 CDC42SE1Q9NRR8 79 aa5.04□□□□□ -1.6
ITGB1-204ENST00000417122 PCP4P48539 62 aa5.01□□□□□ -1.61
ITGB1-204ENST00000417122 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
ITGB1-204ENST00000417122 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
ITGB1-204ENST00000417122 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
ITGB1-204ENST00000417122 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
ITGB1-204ENST00000417122 ROMO1P60602 79 aa4.96□□□□□ -1.62
ITGB1-204ENST00000417122 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
ITGB1-204ENST00000417122 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
ITGB1-204ENST00000417122 KRTAP12-4P60329 112 aa4.95□□□□□ -1.62
ITGB1-204ENST00000417122 KRTAP5-3Q6L8H2 238 aa4.87□□□□□ -1.63
ITGB1-204ENST00000417122 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
ITGB1-204ENST00000417122 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
ITGB1-204ENST00000417122 MT1AP04731 61 aa4.74□□□□□ -1.65
ITGB1-204ENST00000417122 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
ITGB1-204ENST00000417122 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
ITGB1-204ENST00000417122 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
ITGB1-204ENST00000417122 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
ITGB1-204ENST00000417122 BRK1Q8WUW1 75 aa4.4□□□□□ -1.71
ITGB1-204ENST00000417122 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
ITGB1-204ENST00000417122 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
ITGB1-204ENST00000417122 MT3P25713 68 aa4.34□□□□□ -1.71
ITGB1-204ENST00000417122 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
ITGB1-204ENST00000417122 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
ITGB1-204ENST00000417122 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
ITGB1-204ENST00000417122 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
ITGB1-204ENST00000417122 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
ITGB1-204ENST00000417122 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
ITGB1-204ENST00000417122 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
ITGB1-204ENST00000417122 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
ITGB1-204ENST00000417122 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
ITGB1-204ENST00000417122 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
ITGB1-204ENST00000417122 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
ITGB1-204ENST00000417122 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
ITGB1-204ENST00000417122 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-204ENST00000417122 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
ITGB1-204ENST00000417122 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
ITGB1-204ENST00000417122 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
ITGB1-204ENST00000417122 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
ITGB1-204ENST00000417122 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
ITGB1-204ENST00000417122 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
ITGB1-204ENST00000417122 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
ITGB1-204ENST00000417122 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
ITGB1-204ENST00000417122 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
ITGB1-204ENST00000417122 A0A0A0MQY5 61 aa2.78□□□□□ -1.96
ITGB1-204ENST00000417122 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
ITGB1-204ENST00000417122 PRM1P04553 51 aa2.54□□□□□ -2
ITGB1-204ENST00000417122 INE1O15225 51 aa2.44□□□□□ -2.02
ITGB1-204ENST00000417122 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
ITGB1-204ENST00000417122 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 87.9 ms