RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
SBDSP1-201ENST00000415772 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
SBDSP1-201ENST00000415772 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
SBDSP1-201ENST00000415772 MT4P47944 62 aa5.69□□□□□ -1.5
SBDSP1-201ENST00000415772 KRTAP19-4Q3LI73 84 aa5.69□□□□□ -1.5
SBDSP1-201ENST00000415772 A8MU10 97 aa5.68□□□□□ -1.5
SBDSP1-201ENST00000415772 MT1GP13640 62 aa5.68□□□□□ -1.5
SBDSP1-201ENST00000415772 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
SBDSP1-201ENST00000415772 UQCR11O14957 56 aa5.62□□□□□ -1.51
SBDSP1-201ENST00000415772 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
SBDSP1-201ENST00000415772 TNP1P09430 55 aa5.56□□□□□ -1.52
SBDSP1-201ENST00000415772 MT1MQ8N339 61 aa5.55□□□□□ -1.52
SBDSP1-201ENST00000415772 V9GYY9 64 aa5.55□□□□□ -1.52
SBDSP1-201ENST00000415772 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
SBDSP1-201ENST00000415772 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
SBDSP1-201ENST00000415772 MT1LQ93083 61 aa5.49□□□□□ -1.53
SBDSP1-201ENST00000415772 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
SBDSP1-201ENST00000415772 Q1T7F1 81 aa5.46□□□□□ -1.54
SBDSP1-201ENST00000415772 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
SBDSP1-201ENST00000415772 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
SBDSP1-201ENST00000415772 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
SBDSP1-201ENST00000415772 K7ERS5 55 aa5.41□□□□□ -1.54
SBDSP1-201ENST00000415772 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
SBDSP1-201ENST00000415772 PSPHP1O15172 72 aa5.38□□□□□ -1.55
SBDSP1-201ENST00000415772 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
SBDSP1-201ENST00000415772 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
SBDSP1-201ENST00000415772 KRTAP5-7Q6L8G8 165 aa5.29□□□□□ -1.56
SBDSP1-201ENST00000415772 A6NED7 52 aa5.24□□□□□ -1.57
SBDSP1-201ENST00000415772 PCP4P48539 62 aa5.24□□□□□ -1.57
SBDSP1-201ENST00000415772 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
SBDSP1-201ENST00000415772 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
SBDSP1-201ENST00000415772 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
SBDSP1-201ENST00000415772 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
SBDSP1-201ENST00000415772 KRTAP12-4P60329 112 aa5.15□□□□□ -1.59
SBDSP1-201ENST00000415772 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
SBDSP1-201ENST00000415772 KRTAP5-5Q701N2 237 aaPredicted RBP5.05□□□□□ -1.6
SBDSP1-201ENST00000415772 ROMO1P60602 79 aa5.01□□□□□ -1.61
SBDSP1-201ENST00000415772 H3BS24 57 aa5□□□□□ -1.61
SBDSP1-201ENST00000415772 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
SBDSP1-201ENST00000415772 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
SBDSP1-201ENST00000415772 LCE3CQ5T5A8 94 aa4.84□□□□□ -1.63
SBDSP1-201ENST00000415772 MT1AP04731 61 aa4.68□□□□□ -1.66
SBDSP1-201ENST00000415772 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
SBDSP1-201ENST00000415772 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
SBDSP1-201ENST00000415772 KRTAP5-8O75690 187 aa4.63□□□□□ -1.67
SBDSP1-201ENST00000415772 MUC5ACP98088 5654 aa4.61□□□□□ -1.67
SBDSP1-201ENST00000415772 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
SBDSP1-201ENST00000415772 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
SBDSP1-201ENST00000415772 BRK1Q8WUW1 75 aa4.59□□□□□ -1.67
SBDSP1-201ENST00000415772 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
SBDSP1-201ENST00000415772 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
SBDSP1-201ENST00000415772 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
SBDSP1-201ENST00000415772 PMAIP1Q13794 54 aa4.36□□□□□ -1.71
SBDSP1-201ENST00000415772 MT3P25713 68 aa4.34□□□□□ -1.71
SBDSP1-201ENST00000415772 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
SBDSP1-201ENST00000415772 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
SBDSP1-201ENST00000415772 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
SBDSP1-201ENST00000415772 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
SBDSP1-201ENST00000415772 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
SBDSP1-201ENST00000415772 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
SBDSP1-201ENST00000415772 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
SBDSP1-201ENST00000415772 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
SBDSP1-201ENST00000415772 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
SBDSP1-201ENST00000415772 SVIPQ8NHG7 77 aa3.7□□□□□ -1.82
SBDSP1-201ENST00000415772 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
SBDSP1-201ENST00000415772 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
SBDSP1-201ENST00000415772 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
SBDSP1-201ENST00000415772 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
SBDSP1-201ENST00000415772 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
SBDSP1-201ENST00000415772 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
SBDSP1-201ENST00000415772 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
SBDSP1-201ENST00000415772 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
SBDSP1-201ENST00000415772 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
SBDSP1-201ENST00000415772 PRM1P04553 51 aa2.53□□□□□ -2
SBDSP1-201ENST00000415772 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
SBDSP1-201ENST00000415772 INE1O15225 51 aa2.4□□□□□ -2.03
SBDSP1-201ENST00000415772 A0A0A0MQY5 61 aa2.36□□□□□ -2.03
SBDSP1-201ENST00000415772 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 76.7 ms