RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 KRTAP4-3Q9BYR4 195 aa8.65□□□□□ -1.02
HLA-C-204ENST00000415537 UQCR11O14957 56 aa8.64□□□□□ -1.03
HLA-C-204ENST00000415537 MT4P47944 62 aa8.64□□□□□ -1.03
HLA-C-204ENST00000415537 GPR98Q8WXG9 6306 aa8.63□□□□□ -1.03
HLA-C-204ENST00000415537 TMEM258P61165 79 aa8.6□□□□□ -1.03
HLA-C-204ENST00000415537 KRTAP12-3P60328 96 aa8.55□□□□□ -1.04
HLA-C-204ENST00000415537 KRTAP5-4Q6L8H1 288 aa8.49□□□□□ -1.05
HLA-C-204ENST00000415537 HMCN1Q96RW7 5635 aa8.48□□□□□ -1.05
HLA-C-204ENST00000415537 KRTAP4-7Q9BYR0 210 aa8.43□□□□□ -1.06
HLA-C-204ENST00000415537 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
HLA-C-204ENST00000415537 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
HLA-C-204ENST00000415537 KRTAP4-6Q9BYQ5 205 aa8.35□□□□□ -1.07
HLA-C-204ENST00000415537 K7ERS5 55 aa8.34□□□□□ -1.07
HLA-C-204ENST00000415537 V9GYY9 64 aa8.21□□□□□ -1.1
HLA-C-204ENST00000415537 PSPHP1O15172 72 aa8.19□□□□□ -1.1
HLA-C-204ENST00000415537 AHNAK2Q8IVF2 5795 aa8.18□□□□□ -1.1
HLA-C-204ENST00000415537 PCP4P48539 62 aa8.17□□□□□ -1.1
HLA-C-204ENST00000415537 KRTAP5-10Q6L8G5 202 aa8.13□□□□□ -1.11
HLA-C-204ENST00000415537 KRTAP5-5Q701N2 237 aaPredicted RBP8.11□□□□□ -1.11
HLA-C-204ENST00000415537 Q1T7F1 81 aa8.1□□□□□ -1.11
HLA-C-204ENST00000415537 KRTAP19-4Q3LI73 84 aa8.08□□□□□ -1.12
HLA-C-204ENST00000415537 KRTAP23-1A1A580 65 aa8.04□□□□□ -1.12
HLA-C-204ENST00000415537 KRTAP20-2Q3LI61 65 aa8.04□□□□□ -1.12
HLA-C-204ENST00000415537 KRTAP12-4P60329 112 aa8.01□□□□□ -1.13
HLA-C-204ENST00000415537 LOC100996750A0A140TA64 210 aa8□□□□□ -1.13
HLA-C-204ENST00000415537 SPRR5A0A1B0GTR4 108 aa8□□□□□ -1.13
HLA-C-204ENST00000415537 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.14
HLA-C-204ENST00000415537 KRTAP5-3Q6L8H2 238 aa7.95□□□□□ -1.14
HLA-C-204ENST00000415537 A6NED7 52 aa7.92□□□□□ -1.14
HLA-C-204ENST00000415537 LCE3CQ5T5A8 94 aa7.86□□□□□ -1.15
HLA-C-204ENST00000415537 CDC42SE1Q9NRR8 79 aa7.85□□□□□ -1.15
HLA-C-204ENST00000415537 KRTAP5-7Q6L8G8 165 aa7.83□□□□□ -1.16
HLA-C-204ENST00000415537 SYNE1Q8NF91 8797 aaKnown RBP7.77□□□□□ -1.17
HLA-C-204ENST00000415537 ROMO1P60602 79 aa7.69□□□□□ -1.18
HLA-C-204ENST00000415537 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
HLA-C-204ENST00000415537 MT1AP04731 61 aa7.55□□□□□ -1.2
HLA-C-204ENST00000415537 KRTAP6-1Q3LI64 71 aa7.51□□□□□ -1.21
HLA-C-204ENST00000415537 KRTAP5-2Q701N4 177 aa7.41□□□□□ -1.22
HLA-C-204ENST00000415537 KRTAP4-11Q9BYQ6 195 aa7.37□□□□□ -1.23
HLA-C-204ENST00000415537 KRTAP9-6A8MVA2 160 aa7.36□□□□□ -1.23
HLA-C-204ENST00000415537 KRTAP9-4Q9BYQ2 154 aa7.33□□□□□ -1.24
HLA-C-204ENST00000415537 KRTAP6-2Q3LI66 62 aa7.2□□□□□ -1.26
HLA-C-204ENST00000415537 KRTAP5-8O75690 187 aa7.1□□□□□ -1.27
HLA-C-204ENST00000415537 OBSCNQ5VST9 7968 aa7.02□□□□□ -1.28
HLA-C-204ENST00000415537 MT3P25713 68 aa6.95□□□□□ -1.3
HLA-C-204ENST00000415537 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
HLA-C-204ENST00000415537 KRTAP9-9Q9BYP9 154 aa6.81□□□□□ -1.32
HLA-C-204ENST00000415537 MUC5ACP98088 5654 aa6.73□□□□□ -1.33
HLA-C-204ENST00000415537 MUC5BQ9HC84 5762 aaPredicted RBP6.73□□□□□ -1.33
HLA-C-204ENST00000415537 AHNAKQ09666 5890 aaKnown RBP6.68□□□□□ -1.34
HLA-C-204ENST00000415537 KRTAP5-1Q6L8H4 278 aa6.67□□□□□ -1.34
HLA-C-204ENST00000415537 PRO0628Q9UI54 55 aa6.52□□□□□ -1.37
HLA-C-204ENST00000415537 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
HLA-C-204ENST00000415537 LCE1EQ5T753 118 aa6.38□□□□□ -1.39
HLA-C-204ENST00000415537 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
HLA-C-204ENST00000415537 LCE1BQ5T7P3 118 aa6.05□□□□□ -1.44
HLA-C-204ENST00000415537 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
HLA-C-204ENST00000415537 KRTAP4-2Q9BYR5 136 aa6.01□□□□□ -1.45
HLA-C-204ENST00000415537 LCE1CQ5T751 118 aa5.92□□□□□ -1.46
HLA-C-204ENST00000415537 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
HLA-C-204ENST00000415537 LCE3DQ9BYE3 92 aa5.67□□□□□ -1.5
HLA-C-204ENST00000415537 KRTAP4-12Q9BQ66 201 aa5.51□□□□□ -1.53
HLA-C-204ENST00000415537 KRTAP5-11Q6L8G4 156 aa5.36□□□□□ -1.55
HLA-C-204ENST00000415537 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.35□□□□□ -1.55
HLA-C-204ENST00000415537 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
HLA-C-204ENST00000415537 LCE1FQ5T754 118 aa5.26□□□□□ -1.57
HLA-C-204ENST00000415537 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
HLA-C-204ENST00000415537 KRTAP21-2Q3LI59 83 aa4.93□□□□□ -1.62
HLA-C-204ENST00000415537 PHGR1C9JFL3 82 aa4.77□□□□□ -1.65
HLA-C-204ENST00000415537 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
HLA-C-204ENST00000415537 KRTAP4-4Q9BYR3 166 aa4.56□□□□□ -1.68
HLA-C-204ENST00000415537 MUC19Q7Z5P9 8384 aa4.32□□□□□ -1.72
HLA-C-204ENST00000415537 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
HLA-C-204ENST00000415537 PRM1P04553 51 aa3.92□□□□□ -1.78
HLA-C-204ENST00000415537 H3BS24 57 aa3.89□□□□□ -1.79
HLA-C-204ENST00000415537 INE1O15225 51 aa3.88□□□□□ -1.79
HLA-C-204ENST00000415537 KRTAP21-1Q3LI58 79 aa3.63□□□□□ -1.83
HLA-C-204ENST00000415537 MUC16Q8WXI7 14507 aa3.06□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 185.2 ms