RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 KRTAP4-3Q9BYR4 195 aa7.02□□□□□ -1.29
CTTN-205ENST00000415461 UQCR11O14957 56 aa6.99□□□□□ -1.29
CTTN-205ENST00000415461 LCE1DQ5T752 114 aa6.99□□□□□ -1.29
CTTN-205ENST00000415461 HMCN1Q96RW7 5635 aa6.97□□□□□ -1.29
CTTN-205ENST00000415461 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
CTTN-205ENST00000415461 MT4P47944 62 aa6.92□□□□□ -1.3
CTTN-205ENST00000415461 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
CTTN-205ENST00000415461 MIR22HGQ0VDD5 57 aa6.84□□□□□ -1.31
CTTN-205ENST00000415461 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
CTTN-205ENST00000415461 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
CTTN-205ENST00000415461 KRTAP25-1Q3LHN0 102 aa6.75□□□□□ -1.33
CTTN-205ENST00000415461 AHNAK2Q8IVF2 5795 aa6.73□□□□□ -1.33
CTTN-205ENST00000415461 PSPHP1O15172 72 aa6.71□□□□□ -1.34
CTTN-205ENST00000415461 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
CTTN-205ENST00000415461 K7ERS5 55 aa6.69□□□□□ -1.34
CTTN-205ENST00000415461 V9GYY9 64 aa6.66□□□□□ -1.34
CTTN-205ENST00000415461 Q1T7F1 81 aa6.63□□□□□ -1.35
CTTN-205ENST00000415461 KRTAP5-5Q701N2 237 aaPredicted RBP6.56□□□□□ -1.36
CTTN-205ENST00000415461 KRTAP5-10Q6L8G5 202 aa6.51□□□□□ -1.37
CTTN-205ENST00000415461 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
CTTN-205ENST00000415461 A6NED7 52 aa6.47□□□□□ -1.37
CTTN-205ENST00000415461 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
CTTN-205ENST00000415461 KRTAP20-2Q3LI61 65 aa6.46□□□□□ -1.38
CTTN-205ENST00000415461 KRTAP15-1Q3LI76 137 aa6.43□□□□□ -1.38
CTTN-205ENST00000415461 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
CTTN-205ENST00000415461 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
CTTN-205ENST00000415461 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
CTTN-205ENST00000415461 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
CTTN-205ENST00000415461 CDC42SE1Q9NRR8 79 aa6.35□□□□□ -1.39
CTTN-205ENST00000415461 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
CTTN-205ENST00000415461 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
CTTN-205ENST00000415461 SVIPQ8NHG7 77 aa6.34□□□□□ -1.39
CTTN-205ENST00000415461 PCP4P48539 62 aa6.33□□□□□ -1.4
CTTN-205ENST00000415461 ROMO1P60602 79 aa6.25□□□□□ -1.41
CTTN-205ENST00000415461 KRTAP5-7Q6L8G8 165 aa6.24□□□□□ -1.41
CTTN-205ENST00000415461 RPS28P62857 69 aaKnown RBP6.19□□□□□ -1.42
CTTN-205ENST00000415461 MT1AP04731 61 aa6.09□□□□□ -1.43
CTTN-205ENST00000415461 KRTAP6-1Q3LI64 71 aa6.08□□□□□ -1.44
CTTN-205ENST00000415461 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
CTTN-205ENST00000415461 KRTAP5-2Q701N4 177 aa5.99□□□□□ -1.45
CTTN-205ENST00000415461 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
CTTN-205ENST00000415461 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
CTTN-205ENST00000415461 KRTAP6-2Q3LI66 62 aa5.81□□□□□ -1.48
CTTN-205ENST00000415461 KRTAP5-8O75690 187 aa5.71□□□□□ -1.5
CTTN-205ENST00000415461 OBSCNQ5VST9 7968 aa5.65□□□□□ -1.51
CTTN-205ENST00000415461 MUC5BQ9HC84 5762 aaPredicted RBP5.58□□□□□ -1.52
CTTN-205ENST00000415461 MT3P25713 68 aa5.56□□□□□ -1.52
CTTN-205ENST00000415461 AHNAKQ09666 5890 aaKnown RBP5.54□□□□□ -1.52
CTTN-205ENST00000415461 MUC5ACP98088 5654 aa5.49□□□□□ -1.53
CTTN-205ENST00000415461 BRK1Q8WUW1 75 aa5.46□□□□□ -1.54
CTTN-205ENST00000415461 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
CTTN-205ENST00000415461 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
CTTN-205ENST00000415461 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
CTTN-205ENST00000415461 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
CTTN-205ENST00000415461 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
CTTN-205ENST00000415461 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
CTTN-205ENST00000415461 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
CTTN-205ENST00000415461 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
CTTN-205ENST00000415461 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
CTTN-205ENST00000415461 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
CTTN-205ENST00000415461 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
CTTN-205ENST00000415461 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
CTTN-205ENST00000415461 H3BS24 57 aa4.34□□□□□ -1.71
CTTN-205ENST00000415461 KRTAP5-11Q6L8G4 156 aa4.31□□□□□ -1.72
CTTN-205ENST00000415461 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
CTTN-205ENST00000415461 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
CTTN-205ENST00000415461 LUZP6Q538Z0 58 aa4.18□□□□□ -1.74
CTTN-205ENST00000415461 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
CTTN-205ENST00000415461 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
CTTN-205ENST00000415461 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
CTTN-205ENST00000415461 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
CTTN-205ENST00000415461 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
CTTN-205ENST00000415461 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
CTTN-205ENST00000415461 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
CTTN-205ENST00000415461 PRM1P04553 51 aa3.22□□□□□ -1.89
CTTN-205ENST00000415461 INE1O15225 51 aa3.2□□□□□ -1.9
CTTN-205ENST00000415461 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
CTTN-205ENST00000415461 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms