RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 MT1MQ8N339 61 aa5.56□□□□□ -1.52
MCF2L-211ENST00000413354 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
MCF2L-211ENST00000413354 V9GYY9 64 aa5.52□□□□□ -1.53
MCF2L-211ENST00000413354 K7ERS5 55 aa5.49□□□□□ -1.53
MCF2L-211ENST00000413354 KRTAP12-3P60328 96 aa5.45□□□□□ -1.54
MCF2L-211ENST00000413354 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
MCF2L-211ENST00000413354 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
MCF2L-211ENST00000413354 PSPHP1O15172 72 aa5.42□□□□□ -1.54
MCF2L-211ENST00000413354 Q1T7F1 81 aa5.42□□□□□ -1.54
MCF2L-211ENST00000413354 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
MCF2L-211ENST00000413354 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
MCF2L-211ENST00000413354 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
MCF2L-211ENST00000413354 MT4P47944 62 aa5.3□□□□□ -1.56
MCF2L-211ENST00000413354 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
MCF2L-211ENST00000413354 A6NED7 52 aa5.28□□□□□ -1.56
MCF2L-211ENST00000413354 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
MCF2L-211ENST00000413354 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
MCF2L-211ENST00000413354 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
MCF2L-211ENST00000413354 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
MCF2L-211ENST00000413354 H3BS24 57 aa5.24□□□□□ -1.57
MCF2L-211ENST00000413354 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
MCF2L-211ENST00000413354 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
MCF2L-211ENST00000413354 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
MCF2L-211ENST00000413354 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
MCF2L-211ENST00000413354 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
MCF2L-211ENST00000413354 ROMO1P60602 79 aa5.07□□□□□ -1.6
MCF2L-211ENST00000413354 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
MCF2L-211ENST00000413354 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
MCF2L-211ENST00000413354 PCP4P48539 62 aa5.05□□□□□ -1.6
MCF2L-211ENST00000413354 LCE3CQ5T5A8 94 aa5.01□□□□□ -1.61
MCF2L-211ENST00000413354 KRTAP12-4P60329 112 aa5□□□□□ -1.61
MCF2L-211ENST00000413354 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
MCF2L-211ENST00000413354 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
MCF2L-211ENST00000413354 KRTAP5-10Q6L8G5 202 aa4.96□□□□□ -1.62
MCF2L-211ENST00000413354 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
MCF2L-211ENST00000413354 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
MCF2L-211ENST00000413354 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
MCF2L-211ENST00000413354 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
MCF2L-211ENST00000413354 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
MCF2L-211ENST00000413354 MT1AP04731 61 aa4.77□□□□□ -1.65
MCF2L-211ENST00000413354 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
MCF2L-211ENST00000413354 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
MCF2L-211ENST00000413354 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
MCF2L-211ENST00000413354 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
MCF2L-211ENST00000413354 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
MCF2L-211ENST00000413354 KRTAP6-2Q3LI66 62 aa4.5□□□□□ -1.69
MCF2L-211ENST00000413354 MT3P25713 68 aa4.38□□□□□ -1.71
MCF2L-211ENST00000413354 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
MCF2L-211ENST00000413354 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
MCF2L-211ENST00000413354 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
MCF2L-211ENST00000413354 OBSCNQ5VST9 7968 aa4.2□□□□□ -1.74
MCF2L-211ENST00000413354 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
MCF2L-211ENST00000413354 AHNAKQ09666 5890 aaKnown RBP4.14□□□□□ -1.75
MCF2L-211ENST00000413354 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
MCF2L-211ENST00000413354 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
MCF2L-211ENST00000413354 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
MCF2L-211ENST00000413354 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
MCF2L-211ENST00000413354 PRO0628Q9UI54 55 aa3.93□□□□□ -1.78
MCF2L-211ENST00000413354 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
MCF2L-211ENST00000413354 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
MCF2L-211ENST00000413354 LCE1CQ5T751 118 aa3.71□□□□□ -1.82
MCF2L-211ENST00000413354 SVIPQ8NHG7 77 aa3.65□□□□□ -1.83
MCF2L-211ENST00000413354 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
MCF2L-211ENST00000413354 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
MCF2L-211ENST00000413354 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
MCF2L-211ENST00000413354 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
MCF2L-211ENST00000413354 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
MCF2L-211ENST00000413354 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
MCF2L-211ENST00000413354 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
MCF2L-211ENST00000413354 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
MCF2L-211ENST00000413354 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
MCF2L-211ENST00000413354 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
MCF2L-211ENST00000413354 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
MCF2L-211ENST00000413354 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
MCF2L-211ENST00000413354 PRM1P04553 51 aa2.57□□□□□ -2
MCF2L-211ENST00000413354 INE1O15225 51 aa2.24□□□□□ -2.05
MCF2L-211ENST00000413354 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
MCF2L-211ENST00000413354 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 88.4 ms