RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
LINC00396-201ENST00000411690 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
LINC00396-201ENST00000411690 CHKB-CPT1BH3BT56 60 aa2.66□□□□□ -1.98
LINC00396-201ENST00000411690 CDC42SE1Q9NRR8 79 aa2.66□□□□□ -1.98
LINC00396-201ENST00000411690 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
LINC00396-201ENST00000411690 DMAC1Q96GE9 116 aa2.65□□□□□ -1.99
LINC00396-201ENST00000411690 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
LINC00396-201ENST00000411690 KRTAP12-2P59991 146 aa2.64□□□□□ -1.99
LINC00396-201ENST00000411690 Q5W150 140 aa2.64□□□□□ -1.99
LINC00396-201ENST00000411690 S4R3F8 94 aa2.64□□□□□ -1.99
LINC00396-201ENST00000411690 A6NED7 52 aa2.63□□□□□ -1.99
LINC00396-201ENST00000411690 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
LINC00396-201ENST00000411690 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
LINC00396-201ENST00000411690 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
LINC00396-201ENST00000411690 MT1XP80297 61 aa2.62□□□□□ -1.99
LINC00396-201ENST00000411690 SPRR5A0A1B0GTR4 108 aa2.61□□□□□ -1.99
LINC00396-201ENST00000411690 LCA10Q71F78 164 aa2.61□□□□□ -1.99
LINC00396-201ENST00000411690 MT4P47944 62 aa2.59□□□□□ -1.99
LINC00396-201ENST00000411690 CRIPTQ9P021 101 aa2.59□□□□□ -1.99
LINC00396-201ENST00000411690 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
LINC00396-201ENST00000411690 SPTSSBQ8NFR3 76 aa2.57□□□□□ -2
LINC00396-201ENST00000411690 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
LINC00396-201ENST00000411690 A0A1B0GU69 56 aa2.56□□□□□ -2
LINC00396-201ENST00000411690 A8MU10 97 aa2.56□□□□□ -2
LINC00396-201ENST00000411690 SPATA8Q6RVD6 105 aa2.56□□□□□ -2
LINC00396-201ENST00000411690 UQCR11O14957 56 aa2.55□□□□□ -2
LINC00396-201ENST00000411690 KRTAP5-8O75690 187 aa2.55□□□□□ -2
LINC00396-201ENST00000411690 PLAC4Q8WY50 150 aa2.53□□□□□ -2
LINC00396-201ENST00000411690 PRAC1Q96KF2 57 aa2.52□□□□□ -2.01
LINC00396-201ENST00000411690 MIR22HGQ0VDD5 57 aa2.51□□□□□ -2.01
LINC00396-201ENST00000411690 LINC01554Q52M75 96 aa2.47□□□□□ -2.01
LINC00396-201ENST00000411690 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
LINC00396-201ENST00000411690 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
LINC00396-201ENST00000411690 ADM2Q7Z4H4 148 aa2.46□□□□□ -2.02
LINC00396-201ENST00000411690 R4GN34 69 aa2.44□□□□□ -2.02
LINC00396-201ENST00000411690 A0A1B0GU33 70 aa2.43□□□□□ -2.02
LINC00396-201ENST00000411690 H0YAA0 97 aa2.43□□□□□ -2.02
LINC00396-201ENST00000411690 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
LINC00396-201ENST00000411690 K7ERS5 55 aa2.41□□□□□ -2.02
LINC00396-201ENST00000411690 M0QZ58 72 aa2.41□□□□□ -2.02
LINC00396-201ENST00000411690 MT1EP04732 61 aa2.35□□□□□ -2.03
LINC00396-201ENST00000411690 P0C880 135 aa2.34□□□□□ -2.03
LINC00396-201ENST00000411690 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
LINC00396-201ENST00000411690 KRTAP19-7Q3SYF9 63 aa2.34□□□□□ -2.03
LINC00396-201ENST00000411690 MT1GP13640 62 aa2.33□□□□□ -2.04
LINC00396-201ENST00000411690 PP632Q6XCG6 107 aa2.32□□□□□ -2.04
LINC00396-201ENST00000411690 ROMO1P60602 79 aa2.31□□□□□ -2.04
LINC00396-201ENST00000411690 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
LINC00396-201ENST00000411690 CAMK2N1Q7Z7J9 78 aa2.28□□□□□ -2.04
LINC00396-201ENST00000411690 MT1MQ8N339 61 aa2.27□□□□□ -2.05
LINC00396-201ENST00000411690 KRTAP13-4Q3LI77 160 aa2.25□□□□□ -2.05
LINC00396-201ENST00000411690 NDUFAF8A1L188 74 aa2.24□□□□□ -2.05
LINC00396-201ENST00000411690 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
LINC00396-201ENST00000411690 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
LINC00396-201ENST00000411690 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
LINC00396-201ENST00000411690 A0A0D9SG42 100 aa2.21□□□□□ -2.06
LINC00396-201ENST00000411690 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
LINC00396-201ENST00000411690 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
LINC00396-201ENST00000411690 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
LINC00396-201ENST00000411690 MT1LQ93083 61 aa2.18□□□□□ -2.06
LINC00396-201ENST00000411690 SPINT4Q6UDR6 99 aa2.17□□□□□ -2.06
LINC00396-201ENST00000411690 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
LINC00396-201ENST00000411690 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
LINC00396-201ENST00000411690 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
LINC00396-201ENST00000411690 TNP1P09430 55 aa2.04□□□□□ -2.08
LINC00396-201ENST00000411690 LUZP6Q538Z0 58 aa2.02□□□□□ -2.09
LINC00396-201ENST00000411690 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
LINC00396-201ENST00000411690 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
LINC00396-201ENST00000411690 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
LINC00396-201ENST00000411690 KRTAP6-1Q3LI64 71 aa1.86□□□□□ -2.11
LINC00396-201ENST00000411690 MT1AP04731 61 aa1.84□□□□□ -2.11
LINC00396-201ENST00000411690 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
LINC00396-201ENST00000411690 INE1O15225 51 aa1.79□□□□□ -2.12
LINC00396-201ENST00000411690 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
LINC00396-201ENST00000411690 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
LINC00396-201ENST00000411690 PRM1P04553 51 aa1.18□□□□□ -2.22
LINC00396-201ENST00000411690 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 97.7 ms