RNA–Protein interactions for RNA: ENST00000410497.1

RNU6-955P-201, Transcript of RNA, U6 small nuclear 955, pseudogene, humanhuman

BASIC

Gene RNU6-955P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-955P-201ENST00000410497 MT1BP07438 61 aa0.32□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP4-1Q9BYQ7 146 aa0.32□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP4-7Q9BYR0 210 aa0.32□□□□□ -2.36
RNU6-955P-201ENST00000410497 MUC17Q685J3 4493 aa0.32□□□□□ -2.36
RNU6-955P-201ENST00000410497 PCLOQ9Y6V0 5065 aa0.31□□□□□ -2.36
RNU6-955P-201ENST00000410497 RNF213Q63HN8 5207 aa0.31□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP5-5Q701N2 237 aaPredicted RBP0.31□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP4-11Q9BYQ6 195 aa0.31□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP4-9Q9BYQ8 210 aa0.31□□□□□ -2.36
RNU6-955P-201ENST00000410497 MDN1Q9NU22 5596 aa0.31□□□□□ -2.36
RNU6-955P-201ENST00000410497 LOC100996750A0A140TA64 210 aa0.3□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP19-7Q3SYF9 63 aa0.3□□□□□ -2.36
RNU6-955P-201ENST00000410497 RYR1P21817 5038 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 OBSCNQ5VST9 7968 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 FCGBPQ9Y6R7 5405 aaPredicted RBP0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 SSPOA2VEC9 5147 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 HERC1Q15751 4861 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 BIRC6Q9NR09 4857 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP4-8A0A0G2JLE6 195 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 LCE1CQ5T751 118 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 LCE1BQ5T7P3 118 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP4-8Q9BYQ9 185 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 UBR4Q5T4S7 5183 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 USH2AO75445 5202 aa0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 KMT2CQ8NEZ4 4911 aaKnown RBP0.29□□□□□ -2.36
RNU6-955P-201ENST00000410497 LRP2P98164 4655 aa0.28□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP6-1Q3LI64 71 aa0.28□□□□□ -2.36
RNU6-955P-201ENST00000410497 KRTAP4-12Q9BQ66 201 aa0.28□□□□□ -2.36
RNU6-955P-201ENST00000410497 RYR3Q15413 4870 aa0.28□□□□□ -2.37
RNU6-955P-201ENST00000410497 DNHD1Q96M86 4753 aa0.28□□□□□ -2.37
RNU6-955P-201ENST00000410497 MUC12Q9UKN1 5478 aa0.27□□□□□ -2.37
RNU6-955P-201ENST00000410497 KRTAP19-2Q3LHN2 52 aa0.27□□□□□ -2.37
RNU6-955P-201ENST00000410497 KRTAP4-3Q9BYR4 195 aa0.27□□□□□ -2.37
RNU6-955P-201ENST00000410497 ABCA13Q86UQ4 5058 aa0.27□□□□□ -2.37
RNU6-955P-201ENST00000410497 HMCN1Q96RW7 5635 aa0.27□□□□□ -2.37
RNU6-955P-201ENST00000410497 KIAA1109Q2LD37 5005 aa0.26□□□□□ -2.37
RNU6-955P-201ENST00000410497 EPPK1P58107 5090 aaKnown RBP0.26□□□□□ -2.37
RNU6-955P-201ENST00000410497 HMCN2Q8NDA2 5059 aa0.26□□□□□ -2.37
RNU6-955P-201ENST00000410497 KRTAP21-1Q3LI58 79 aa0.26□□□□□ -2.37
RNU6-955P-201ENST00000410497 HERC2O95714 4834 aa0.26□□□□□ -2.37
RNU6-955P-201ENST00000410497 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
RNU6-955P-201ENST00000410497 MUC5ACP98088 5654 aa0.26□□□□□ -2.37
RNU6-955P-201ENST00000410497 RYR2Q92736 4967 aa0.25□□□□□ -2.37
RNU6-955P-201ENST00000410497 MUC19Q7Z5P9 8384 aa0.24□□□□□ -2.37
RNU6-955P-201ENST00000410497 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.23□□□□□ -2.37
RNU6-955P-201ENST00000410497 KRTAP5-2Q701N4 177 aa0.23□□□□□ -2.37
RNU6-955P-201ENST00000410497 SYNE1Q8NF91 8797 aaKnown RBP0.22□□□□□ -2.37
RNU6-955P-201ENST00000410497 KRTAP5-4Q6L8H1 288 aa0.22□□□□□ -2.37
RNU6-955P-201ENST00000410497 KRTAP5-3Q6L8H2 238 aa0.22□□□□□ -2.37
RNU6-955P-201ENST00000410497 KRTAP4-5Q9BYR2 181 aa0.22□□□□□ -2.37
RNU6-955P-201ENST00000410497 MUC5BQ9HC84 5762 aaPredicted RBP0.22□□□□□ -2.37
RNU6-955P-201ENST00000410497 KRTAP5-8O75690 187 aa0.21□□□□□ -2.38
RNU6-955P-201ENST00000410497 KRTAP19-6Q3LI70 58 aa0.21□□□□□ -2.38
RNU6-955P-201ENST00000410497 KRTAP5-10Q6L8G5 202 aa0.21□□□□□ -2.38
RNU6-955P-201ENST00000410497 KRTAP5-1Q6L8H4 278 aa0.21□□□□□ -2.38
RNU6-955P-201ENST00000410497 KRTAP4-2Q9BYR5 136 aa0.21□□□□□ -2.38
RNU6-955P-201ENST00000410497 DSTQ03001 7570 aaKnown RBP0.21□□□□□ -2.38
RNU6-955P-201ENST00000410497 MT4P47944 62 aa0.2□□□□□ -2.38
RNU6-955P-201ENST00000410497 KRTAP20-2Q3LI61 65 aa0.2□□□□□ -2.38
RNU6-955P-201ENST00000410497 KRTAP4-6Q9BYQ5 205 aa0.2□□□□□ -2.38
RNU6-955P-201ENST00000410497 MACF1Q9UPN3 7388 aaKnown RBP0.17□□□□□ -2.38
RNU6-955P-201ENST00000410497 AHNAK2Q8IVF2 5795 aa0.17□□□□□ -2.38
RNU6-955P-201ENST00000410497 KRTAP4-4Q9BYR3 166 aa0.17□□□□□ -2.38
RNU6-955P-201ENST00000410497 KRTAP5-9P26371 169 aa0.16□□□□□ -2.38
RNU6-955P-201ENST00000410497 KRTAP21-2Q3LI59 83 aa0.14□□□□□ -2.39
RNU6-955P-201ENST00000410497 KRTAP20-1Q3LI63 56 aa0.14□□□□□ -2.39
RNU6-955P-201ENST00000410497 KRTAP5-7Q6L8G8 165 aa0.14□□□□□ -2.39
RNU6-955P-201ENST00000410497 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.14□□□□□ -2.39
RNU6-955P-201ENST00000410497 MUC16Q8WXI7 14507 aa0.14□□□□□ -2.39
RNU6-955P-201ENST00000410497 AHNAKQ09666 5890 aaKnown RBP0.14□□□□□ -2.39
RNU6-955P-201ENST00000410497 SYNE2Q8WXH0 6885 aaKnown RBP0.13□□□□□ -2.39
RNU6-955P-201ENST00000410497 KRTAP5-11Q6L8G4 156 aa0.13□□□□□ -2.39
RNU6-955P-201ENST00000410497 KRTAP17-1Q9BYP8 105 aa0.13□□□□□ -2.39
RNU6-955P-201ENST00000410497 GPR98Q8WXG9 6306 aa0.12□□□□□ -2.39
RNU6-955P-201ENST00000410497 FSIP2Q5CZC0 6907 aa0.11□□□□□ -2.39
RNU6-955P-201ENST00000410497 PHGR1C9JFL3 82 aa0.11□□□□□ -2.39
RNU6-955P-201ENST00000410497 NEBP20929 6669 aa0.09□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms