RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
LSM5-202ENST00000409292 PCP4L1A6NKN8 68 aa2.79□□□□□ -1.96
LSM5-202ENST00000409292 J3QR89 54 aa2.79□□□□□ -1.96
LSM5-202ENST00000409292 SEC61GP60059 68 aa2.79□□□□□ -1.96
LSM5-202ENST00000409292 SMIM20Q8N5G0 67 aa2.78□□□□□ -1.96
LSM5-202ENST00000409292 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
LSM5-202ENST00000409292 PRAC1Q96KF2 57 aa2.77□□□□□ -1.97
LSM5-202ENST00000409292 SERP1Q9Y6X1 66 aa2.77□□□□□ -1.97
LSM5-202ENST00000409292 A8MU10 97 aa2.76□□□□□ -1.97
LSM5-202ENST00000409292 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
LSM5-202ENST00000409292 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
LSM5-202ENST00000409292 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
LSM5-202ENST00000409292 KRTAP13-4Q3LI77 160 aa2.75□□□□□ -1.97
LSM5-202ENST00000409292 MT1MQ8N339 61 aa2.75□□□□□ -1.97
LSM5-202ENST00000409292 KRTAP5-7Q6L8G8 165 aa2.72□□□□□ -1.97
LSM5-202ENST00000409292 MT1LQ93083 61 aa2.71□□□□□ -1.98
LSM5-202ENST00000409292 SPANXA2-OT1Q8N9U9 137 aa2.7□□□□□ -1.98
LSM5-202ENST00000409292 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
LSM5-202ENST00000409292 A0A1B0GU33 70 aa2.67□□□□□ -1.98
LSM5-202ENST00000409292 TNP1P09430 55 aa2.67□□□□□ -1.98
LSM5-202ENST00000409292 SNURFQ9Y675 71 aa2.67□□□□□ -1.98
LSM5-202ENST00000409292 SPATA8Q6RVD6 105 aa2.66□□□□□ -1.98
LSM5-202ENST00000409292 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
LSM5-202ENST00000409292 SMIM26A0A096LP01 95 aa2.65□□□□□ -1.99
LSM5-202ENST00000409292 C10orf95Q9H7T3 257 aa2.65□□□□□ -1.99
LSM5-202ENST00000409292 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
LSM5-202ENST00000409292 KRTAP12-1P59990 96 aa2.62□□□□□ -1.99
LSM5-202ENST00000409292 COA5Q86WW8 74 aa2.62□□□□□ -1.99
LSM5-202ENST00000409292 A0A1B0GV90 55 aa2.6□□□□□ -1.99
LSM5-202ENST00000409292 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
LSM5-202ENST00000409292 SERP2Q8N6R1 65 aa2.58□□□□□ -2
LSM5-202ENST00000409292 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
LSM5-202ENST00000409292 A0A1B0GU69 56 aa2.56□□□□□ -2
LSM5-202ENST00000409292 KRTAP12-3P60328 96 aa2.55□□□□□ -2
LSM5-202ENST00000409292 K7ERU9 68 aa2.54□□□□□ -2
LSM5-202ENST00000409292 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
LSM5-202ENST00000409292 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
LSM5-202ENST00000409292 PRR15LQ9BU68 103 aa2.48□□□□□ -2.01
LSM5-202ENST00000409292 COX7CP15954 63 aa2.4□□□□□ -2.03
LSM5-202ENST00000409292 KRTAP25-1Q3LHN0 102 aa2.4□□□□□ -2.03
LSM5-202ENST00000409292 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
LSM5-202ENST00000409292 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
LSM5-202ENST00000409292 H7BZZ5 65 aa2.37□□□□□ -2.03
LSM5-202ENST00000409292 K7ERS5 55 aa2.36□□□□□ -2.03
LSM5-202ENST00000409292 UQCR11O14957 56 aa2.34□□□□□ -2.03
LSM5-202ENST00000409292 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
LSM5-202ENST00000409292 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
LSM5-202ENST00000409292 MT1AP04731 61 aa2.33□□□□□ -2.04
LSM5-202ENST00000409292 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
LSM5-202ENST00000409292 ATP5EP56381 51 aaPredicted RBP2.28□□□□□ -2.04
LSM5-202ENST00000409292 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
LSM5-202ENST00000409292 LINC01558Q9Y6Z2 57 aa2.28□□□□□ -2.04
LSM5-202ENST00000409292 MIR22HGQ0VDD5 57 aa2.25□□□□□ -2.05
LSM5-202ENST00000409292 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
LSM5-202ENST00000409292 ANAPC13Q9BS18 74 aa2.23□□□□□ -2.05
LSM5-202ENST00000409292 LCE3DQ9BYE3 92 aa2.22□□□□□ -2.05
LSM5-202ENST00000409292 RPS28P62857 69 aaKnown RBP2.2□□□□□ -2.06
LSM5-202ENST00000409292 CDC42SE1Q9NRR8 79 aa2.14□□□□□ -2.07
LSM5-202ENST00000409292 CCDC179H3BU77 68 aa2.11□□□□□ -2.07
LSM5-202ENST00000409292 V9GYY9 64 aa2.11□□□□□ -2.07
LSM5-202ENST00000409292 TMEM258P61165 79 aa2.1□□□□□ -2.07
LSM5-202ENST00000409292 Q1T7F1 81 aa2.07□□□□□ -2.08
LSM5-202ENST00000409292 PSPHP1O15172 72 aa2.05□□□□□ -2.08
LSM5-202ENST00000409292 ROMO1P60602 79 aa2.05□□□□□ -2.08
LSM5-202ENST00000409292 A6NED7 52 aa2.03□□□□□ -2.08
LSM5-202ENST00000409292 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
LSM5-202ENST00000409292 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
LSM5-202ENST00000409292 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
LSM5-202ENST00000409292 BRK1Q8WUW1 75 aa1.55□□□□□ -2.16
LSM5-202ENST00000409292 LUZP6Q538Z0 58 aa1.46□□□□□ -2.18
LSM5-202ENST00000409292 PMAIP1Q13794 54 aa1.38□□□□□ -2.19
LSM5-202ENST00000409292 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
LSM5-202ENST00000409292 PRO0628Q9UI54 55 aa1.29□□□□□ -2.2
LSM5-202ENST00000409292 KTN1-AS1Q86SY8 53 aa1.06□□□□□ -2.24
LSM5-202ENST00000409292 PRM1P04553 51 aa1□□□□□ -2.25
LSM5-202ENST00000409292 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
LSM5-202ENST00000409292 INE1O15225 51 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 157.4 ms