RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
SDF4-203ENST00000403997 AHNAK2Q8IVF2 5795 aa4.78□□□□□ -1.64
SDF4-203ENST00000403997 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
SDF4-203ENST00000403997 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
SDF4-203ENST00000403997 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
SDF4-203ENST00000403997 KRTAP5-7Q6L8G8 165 aa4.74□□□□□ -1.65
SDF4-203ENST00000403997 MT1LQ93083 61 aa4.73□□□□□ -1.65
SDF4-203ENST00000403997 MT1MQ8N339 61 aa4.71□□□□□ -1.66
SDF4-203ENST00000403997 V9GYY9 64 aa4.69□□□□□ -1.66
SDF4-203ENST00000403997 UQCR11O14957 56 aa4.66□□□□□ -1.66
SDF4-203ENST00000403997 MT4P47944 62 aa4.66□□□□□ -1.66
SDF4-203ENST00000403997 Q1T7F1 81 aa4.63□□□□□ -1.67
SDF4-203ENST00000403997 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
SDF4-203ENST00000403997 LCE4AQ5TA78 99 aa4.6□□□□□ -1.67
SDF4-203ENST00000403997 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
SDF4-203ENST00000403997 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
SDF4-203ENST00000403997 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
SDF4-203ENST00000403997 PSPHP1O15172 72 aa4.52□□□□□ -1.69
SDF4-203ENST00000403997 KRTAP4-7Q9BYR0 210 aa4.52□□□□□ -1.69
SDF4-203ENST00000403997 K7ERS5 55 aa4.49□□□□□ -1.69
SDF4-203ENST00000403997 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
SDF4-203ENST00000403997 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
SDF4-203ENST00000403997 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
SDF4-203ENST00000403997 A6NED7 52 aa4.42□□□□□ -1.7
SDF4-203ENST00000403997 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
SDF4-203ENST00000403997 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
SDF4-203ENST00000403997 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
SDF4-203ENST00000403997 KRTAP19-4Q3LI73 84 aa4.3□□□□□ -1.72
SDF4-203ENST00000403997 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
SDF4-203ENST00000403997 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
SDF4-203ENST00000403997 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
SDF4-203ENST00000403997 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
SDF4-203ENST00000403997 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
SDF4-203ENST00000403997 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
SDF4-203ENST00000403997 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
SDF4-203ENST00000403997 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
SDF4-203ENST00000403997 ROMO1P60602 79 aa4.16□□□□□ -1.74
SDF4-203ENST00000403997 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
SDF4-203ENST00000403997 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
SDF4-203ENST00000403997 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
SDF4-203ENST00000403997 MUC5BQ9HC84 5762 aaPredicted RBP4.03□□□□□ -1.76
SDF4-203ENST00000403997 MT1AP04731 61 aa4.02□□□□□ -1.77
SDF4-203ENST00000403997 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
SDF4-203ENST00000403997 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
SDF4-203ENST00000403997 KRTAP4-11Q9BYQ6 195 aa3.96□□□□□ -1.78
SDF4-203ENST00000403997 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
SDF4-203ENST00000403997 KRTAP9-4Q9BYQ2 154 aa3.91□□□□□ -1.78
SDF4-203ENST00000403997 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
SDF4-203ENST00000403997 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
SDF4-203ENST00000403997 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
SDF4-203ENST00000403997 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
SDF4-203ENST00000403997 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
SDF4-203ENST00000403997 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
SDF4-203ENST00000403997 MT3P25713 68 aa3.7□□□□□ -1.82
SDF4-203ENST00000403997 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
SDF4-203ENST00000403997 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
SDF4-203ENST00000403997 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
SDF4-203ENST00000403997 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
SDF4-203ENST00000403997 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
SDF4-203ENST00000403997 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
SDF4-203ENST00000403997 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
SDF4-203ENST00000403997 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
SDF4-203ENST00000403997 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
SDF4-203ENST00000403997 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
SDF4-203ENST00000403997 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
SDF4-203ENST00000403997 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
SDF4-203ENST00000403997 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
SDF4-203ENST00000403997 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
SDF4-203ENST00000403997 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
SDF4-203ENST00000403997 A0A0A0MQY5 61 aa2.68□□□□□ -1.98
SDF4-203ENST00000403997 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
SDF4-203ENST00000403997 INE1O15225 51 aa2.51□□□□□ -2.01
SDF4-203ENST00000403997 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
SDF4-203ENST00000403997 H3BS24 57 aa2.4□□□□□ -2.03
SDF4-203ENST00000403997 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SDF4-203ENST00000403997 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
SDF4-203ENST00000403997 PRM1P04553 51 aa2.13□□□□□ -2.07
SDF4-203ENST00000403997 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 149.9 ms