RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 ROMO1P60602 79 aa5.34□□□□□ -1.55
SEC13-205ENST00000397101 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
SEC13-205ENST00000397101 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
SEC13-205ENST00000397101 PRO0628Q9UI54 55 aa5.28□□□□□ -1.56
SEC13-205ENST00000397101 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
SEC13-205ENST00000397101 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
SEC13-205ENST00000397101 HMCN1Q96RW7 5635 aa5.18□□□□□ -1.58
SEC13-205ENST00000397101 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
SEC13-205ENST00000397101 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.58
SEC13-205ENST00000397101 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
SEC13-205ENST00000397101 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
SEC13-205ENST00000397101 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
SEC13-205ENST00000397101 KRTAP19-7Q3SYF9 63 aa5.07□□□□□ -1.6
SEC13-205ENST00000397101 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
SEC13-205ENST00000397101 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
SEC13-205ENST00000397101 MT1EP04732 61 aa5.04□□□□□ -1.6
SEC13-205ENST00000397101 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
SEC13-205ENST00000397101 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
SEC13-205ENST00000397101 MT4P47944 62 aa5□□□□□ -1.61
SEC13-205ENST00000397101 MT1GP13640 62 aa4.95□□□□□ -1.62
SEC13-205ENST00000397101 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
SEC13-205ENST00000397101 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
SEC13-205ENST00000397101 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
SEC13-205ENST00000397101 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
SEC13-205ENST00000397101 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
SEC13-205ENST00000397101 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
SEC13-205ENST00000397101 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
SEC13-205ENST00000397101 MT1MQ8N339 61 aa4.82□□□□□ -1.64
SEC13-205ENST00000397101 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
SEC13-205ENST00000397101 MT1LQ93083 61 aa4.77□□□□□ -1.65
SEC13-205ENST00000397101 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
SEC13-205ENST00000397101 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
SEC13-205ENST00000397101 SPRR5A0A1B0GTR4 108 aa4.64□□□□□ -1.67
SEC13-205ENST00000397101 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
SEC13-205ENST00000397101 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
SEC13-205ENST00000397101 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
SEC13-205ENST00000397101 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
SEC13-205ENST00000397101 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
SEC13-205ENST00000397101 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
SEC13-205ENST00000397101 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
SEC13-205ENST00000397101 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
SEC13-205ENST00000397101 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
SEC13-205ENST00000397101 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
SEC13-205ENST00000397101 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
SEC13-205ENST00000397101 MUC5ACP98088 5654 aa4.29□□□□□ -1.72
SEC13-205ENST00000397101 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
SEC13-205ENST00000397101 KRTAP5-2Q701N4 177 aa4.23□□□□□ -1.73
SEC13-205ENST00000397101 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
SEC13-205ENST00000397101 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
SEC13-205ENST00000397101 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
SEC13-205ENST00000397101 MT1AP04731 61 aa4.07□□□□□ -1.76
SEC13-205ENST00000397101 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
SEC13-205ENST00000397101 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
SEC13-205ENST00000397101 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
SEC13-205ENST00000397101 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
SEC13-205ENST00000397101 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
SEC13-205ENST00000397101 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
SEC13-205ENST00000397101 MT3P25713 68 aa3.73□□□□□ -1.81
SEC13-205ENST00000397101 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
SEC13-205ENST00000397101 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
SEC13-205ENST00000397101 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
SEC13-205ENST00000397101 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
SEC13-205ENST00000397101 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
SEC13-205ENST00000397101 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
SEC13-205ENST00000397101 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
SEC13-205ENST00000397101 H3BS24 57 aa3.19□□□□□ -1.9
SEC13-205ENST00000397101 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
SEC13-205ENST00000397101 INE1O15225 51 aa3.14□□□□□ -1.91
SEC13-205ENST00000397101 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
SEC13-205ENST00000397101 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
SEC13-205ENST00000397101 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
SEC13-205ENST00000397101 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
SEC13-205ENST00000397101 PRM1P04553 51 aa2.77□□□□□ -1.97
SEC13-205ENST00000397101 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
SEC13-205ENST00000397101 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
SEC13-205ENST00000397101 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
SEC13-205ENST00000397101 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
SEC13-205ENST00000397101 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms