RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 LINC00643Q86TS7 51 aa2.8□□□□□ -1.96
SCFD1-202ENST00000396629 C10orf95Q9H7T3 257 aa2.8□□□□□ -1.96
SCFD1-202ENST00000396629 CHKB-CPT1BH3BT56 60 aa2.77□□□□□ -1.97
SCFD1-202ENST00000396629 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
SCFD1-202ENST00000396629 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
SCFD1-202ENST00000396629 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
SCFD1-202ENST00000396629 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
SCFD1-202ENST00000396629 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
SCFD1-202ENST00000396629 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
SCFD1-202ENST00000396629 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
SCFD1-202ENST00000396629 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
SCFD1-202ENST00000396629 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
SCFD1-202ENST00000396629 LOC105371267A0A1B0GV96 52 aa2.69□□□□□ -1.98
SCFD1-202ENST00000396629 SCGB1A1P11684 91 aa2.69□□□□□ -1.98
SCFD1-202ENST00000396629 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
SCFD1-202ENST00000396629 SPATA8Q6RVD6 105 aa2.68□□□□□ -1.98
SCFD1-202ENST00000396629 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
SCFD1-202ENST00000396629 TNP1P09430 55 aa2.66□□□□□ -1.98
SCFD1-202ENST00000396629 KRTAP12-3P60328 96 aa2.65□□□□□ -1.99
SCFD1-202ENST00000396629 SERP1Q9Y6X1 66 aa2.61□□□□□ -1.99
SCFD1-202ENST00000396629 A0A1B0GU33 70 aa2.6□□□□□ -1.99
SCFD1-202ENST00000396629 SEC61GP60059 68 aa2.59□□□□□ -1.99
SCFD1-202ENST00000396629 SPANXA2-OT1Q8N9U9 137 aa2.59□□□□□ -2
SCFD1-202ENST00000396629 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
SCFD1-202ENST00000396629 SMIM20Q8N5G0 67 aa2.56□□□□□ -2
SCFD1-202ENST00000396629 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
SCFD1-202ENST00000396629 SNURFQ9Y675 71 aa2.55□□□□□ -2
SCFD1-202ENST00000396629 SMIM26A0A096LP01 95 aa2.53□□□□□ -2
SCFD1-202ENST00000396629 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
SCFD1-202ENST00000396629 COA5Q86WW8 74 aa2.52□□□□□ -2.01
SCFD1-202ENST00000396629 MT1AP04731 61 aa2.52□□□□□ -2.01
SCFD1-202ENST00000396629 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
SCFD1-202ENST00000396629 A8MU10 97 aa2.51□□□□□ -2.01
SCFD1-202ENST00000396629 PCP4L1A6NKN8 68 aa2.48□□□□□ -2.01
SCFD1-202ENST00000396629 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
SCFD1-202ENST00000396629 J3QR89 54 aa2.46□□□□□ -2.02
SCFD1-202ENST00000396629 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
SCFD1-202ENST00000396629 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
SCFD1-202ENST00000396629 A0A1B0GU69 56 aa2.39□□□□□ -2.03
SCFD1-202ENST00000396629 KRTAP25-1Q3LHN0 102 aa2.39□□□□□ -2.03
SCFD1-202ENST00000396629 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
SCFD1-202ENST00000396629 A0A1B0GV90 55 aa2.34□□□□□ -2.03
SCFD1-202ENST00000396629 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
SCFD1-202ENST00000396629 PRR15LQ9BU68 103 aa2.25□□□□□ -2.05
SCFD1-202ENST00000396629 H7BZZ5 65 aa2.24□□□□□ -2.05
SCFD1-202ENST00000396629 K7ERU9 68 aa2.2□□□□□ -2.06
SCFD1-202ENST00000396629 COX7CP15954 63 aa2.18□□□□□ -2.06
SCFD1-202ENST00000396629 UQCR11O14957 56 aa2.15□□□□□ -2.07
SCFD1-202ENST00000396629 LINC01558Q9Y6Z2 57 aa2.15□□□□□ -2.07
SCFD1-202ENST00000396629 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
SCFD1-202ENST00000396629 K7ERS5 55 aa2.07□□□□□ -2.08
SCFD1-202ENST00000396629 MIR22HGQ0VDD5 57 aa2.07□□□□□ -2.08
SCFD1-202ENST00000396629 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
SCFD1-202ENST00000396629 RPS28P62857 69 aaKnown RBP2.03□□□□□ -2.08
SCFD1-202ENST00000396629 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
SCFD1-202ENST00000396629 ATP5EP56381 51 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-202ENST00000396629 PSPHP1O15172 72 aa1.96□□□□□ -2.1
SCFD1-202ENST00000396629 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
SCFD1-202ENST00000396629 CDC42SE1Q9NRR8 79 aa1.93□□□□□ -2.1
SCFD1-202ENST00000396629 Q1T7F1 81 aa1.91□□□□□ -2.1
SCFD1-202ENST00000396629 V9GYY9 64 aa1.91□□□□□ -2.1
SCFD1-202ENST00000396629 CCDC179H3BU77 68 aa1.89□□□□□ -2.11
SCFD1-202ENST00000396629 ANAPC13Q9BS18 74 aa1.89□□□□□ -2.11
SCFD1-202ENST00000396629 ROMO1P60602 79 aa1.88□□□□□ -2.11
SCFD1-202ENST00000396629 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
SCFD1-202ENST00000396629 PRO0628Q9UI54 55 aa1.85□□□□□ -2.11
SCFD1-202ENST00000396629 TMEM258P61165 79 aa1.79□□□□□ -2.12
SCFD1-202ENST00000396629 A6NED7 52 aa1.73□□□□□ -2.13
SCFD1-202ENST00000396629 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
SCFD1-202ENST00000396629 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
SCFD1-202ENST00000396629 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
SCFD1-202ENST00000396629 PMAIP1Q13794 54 aa1.27□□□□□ -2.21
SCFD1-202ENST00000396629 KTN1-AS1Q86SY8 53 aa1.25□□□□□ -2.21
SCFD1-202ENST00000396629 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
SCFD1-202ENST00000396629 BRK1Q8WUW1 75 aa1.11□□□□□ -2.23
SCFD1-202ENST00000396629 PRM1P04553 51 aa0.94□□□□□ -2.26
SCFD1-202ENST00000396629 INE1O15225 51 aa0.86□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 97.3 ms