RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 MT4P47944 62 aa6.37□□□□□ -1.39
FXN-203ENST00000396366 HMCN1Q96RW7 5635 aa6.36□□□□□ -1.39
FXN-203ENST00000396366 LCE4AQ5TA78 99 aa6.35□□□□□ -1.39
FXN-203ENST00000396366 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
FXN-203ENST00000396366 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
FXN-203ENST00000396366 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
FXN-203ENST00000396366 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
FXN-203ENST00000396366 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
FXN-203ENST00000396366 KRTAP12-3P60328 96 aa6.21□□□□□ -1.42
FXN-203ENST00000396366 AHNAK2Q8IVF2 5795 aa6.17□□□□□ -1.42
FXN-203ENST00000396366 UQCR11O14957 56 aa6.14□□□□□ -1.43
FXN-203ENST00000396366 TMEM258P61165 79 aa6.09□□□□□ -1.43
FXN-203ENST00000396366 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
FXN-203ENST00000396366 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
FXN-203ENST00000396366 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
FXN-203ENST00000396366 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
FXN-203ENST00000396366 KRTAP4-12Q9BQ66 201 aa6□□□□□ -1.45
FXN-203ENST00000396366 KRTAP5-5Q701N2 237 aaPredicted RBP5.97□□□□□ -1.45
FXN-203ENST00000396366 KRTAP20-2Q3LI61 65 aa5.92□□□□□ -1.46
FXN-203ENST00000396366 PSPHP1O15172 72 aa5.88□□□□□ -1.47
FXN-203ENST00000396366 K7ERS5 55 aa5.86□□□□□ -1.47
FXN-203ENST00000396366 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
FXN-203ENST00000396366 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
FXN-203ENST00000396366 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
FXN-203ENST00000396366 KRTAP5-7Q6L8G8 165 aa5.78□□□□□ -1.48
FXN-203ENST00000396366 Q1T7F1 81 aa5.77□□□□□ -1.49
FXN-203ENST00000396366 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
FXN-203ENST00000396366 V9GYY9 64 aa5.76□□□□□ -1.49
FXN-203ENST00000396366 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
FXN-203ENST00000396366 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
FXN-203ENST00000396366 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
FXN-203ENST00000396366 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
FXN-203ENST00000396366 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
FXN-203ENST00000396366 A6NED7 52 aa5.63□□□□□ -1.51
FXN-203ENST00000396366 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
FXN-203ENST00000396366 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
FXN-203ENST00000396366 MT1AP04731 61 aa5.52□□□□□ -1.53
FXN-203ENST00000396366 ROMO1P60602 79 aa5.5□□□□□ -1.53
FXN-203ENST00000396366 KRTAP9-6A8MVA2 160 aa5.46□□□□□ -1.54
FXN-203ENST00000396366 KRTAP5-2Q701N4 177 aa5.46□□□□□ -1.54
FXN-203ENST00000396366 RPS28P62857 69 aaKnown RBP5.43□□□□□ -1.54
FXN-203ENST00000396366 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
FXN-203ENST00000396366 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
FXN-203ENST00000396366 KRTAP5-8O75690 187 aa5.26□□□□□ -1.57
FXN-203ENST00000396366 OBSCNQ5VST9 7968 aa5.16□□□□□ -1.58
FXN-203ENST00000396366 PCP4P48539 62 aa5.13□□□□□ -1.59
FXN-203ENST00000396366 AHNAKQ09666 5890 aaKnown RBP5.1□□□□□ -1.59
FXN-203ENST00000396366 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
FXN-203ENST00000396366 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.59
FXN-203ENST00000396366 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
FXN-203ENST00000396366 MT3P25713 68 aa5.04□□□□□ -1.6
FXN-203ENST00000396366 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
FXN-203ENST00000396366 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
FXN-203ENST00000396366 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
FXN-203ENST00000396366 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
FXN-203ENST00000396366 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
FXN-203ENST00000396366 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
FXN-203ENST00000396366 PMAIP1Q13794 54 aa4.37□□□□□ -1.71
FXN-203ENST00000396366 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
FXN-203ENST00000396366 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
FXN-203ENST00000396366 LCE3DQ9BYE3 92 aa4.09□□□□□ -1.75
FXN-203ENST00000396366 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
FXN-203ENST00000396366 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.9□□□□□ -1.79
FXN-203ENST00000396366 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
FXN-203ENST00000396366 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
FXN-203ENST00000396366 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
FXN-203ENST00000396366 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
FXN-203ENST00000396366 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
FXN-203ENST00000396366 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
FXN-203ENST00000396366 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
FXN-203ENST00000396366 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
FXN-203ENST00000396366 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
FXN-203ENST00000396366 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
FXN-203ENST00000396366 PRM1P04553 51 aa2.83□□□□□ -1.96
FXN-203ENST00000396366 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
FXN-203ENST00000396366 MUC16Q8WXI7 14507 aa2.2□□□□□ -2.06
FXN-203ENST00000396366 INE1O15225 51 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 40.1 ms