RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 K7ERS5 55 aa6.19□□□□□ -1.42
UPK3A-202ENST00000396082 PSPHP1O15172 72 aa6.19□□□□□ -1.42
UPK3A-202ENST00000396082 Q1T7F1 81 aa6.14□□□□□ -1.43
UPK3A-202ENST00000396082 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
UPK3A-202ENST00000396082 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
UPK3A-202ENST00000396082 KRTAP4-9Q9BYQ8 210 aa6.08□□□□□ -1.44
UPK3A-202ENST00000396082 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
UPK3A-202ENST00000396082 A6NED7 52 aa6□□□□□ -1.45
UPK3A-202ENST00000396082 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
UPK3A-202ENST00000396082 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
UPK3A-202ENST00000396082 MT4P47944 62 aa5.92□□□□□ -1.46
UPK3A-202ENST00000396082 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
UPK3A-202ENST00000396082 PCP4P48539 62 aa5.85□□□□□ -1.47
UPK3A-202ENST00000396082 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
UPK3A-202ENST00000396082 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.47
UPK3A-202ENST00000396082 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
UPK3A-202ENST00000396082 KRTAP5-4Q6L8H1 288 aa5.82□□□□□ -1.48
UPK3A-202ENST00000396082 GPR98Q8WXG9 6306 aa5.78□□□□□ -1.48
UPK3A-202ENST00000396082 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
UPK3A-202ENST00000396082 ROMO1P60602 79 aa5.73□□□□□ -1.49
UPK3A-202ENST00000396082 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
UPK3A-202ENST00000396082 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
UPK3A-202ENST00000396082 KRTAP4-6Q9BYQ5 205 aa5.71□□□□□ -1.5
UPK3A-202ENST00000396082 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
UPK3A-202ENST00000396082 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
UPK3A-202ENST00000396082 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
UPK3A-202ENST00000396082 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
UPK3A-202ENST00000396082 KRTAP20-2Q3LI61 65 aa5.52□□□□□ -1.53
UPK3A-202ENST00000396082 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
UPK3A-202ENST00000396082 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
UPK3A-202ENST00000396082 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.53
UPK3A-202ENST00000396082 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
UPK3A-202ENST00000396082 KRTAP5-3Q6L8H2 238 aa5.37□□□□□ -1.55
UPK3A-202ENST00000396082 MT1AP04731 61 aa5.31□□□□□ -1.56
UPK3A-202ENST00000396082 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
UPK3A-202ENST00000396082 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
UPK3A-202ENST00000396082 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
UPK3A-202ENST00000396082 BRK1Q8WUW1 75 aa5.21□□□□□ -1.58
UPK3A-202ENST00000396082 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
UPK3A-202ENST00000396082 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
UPK3A-202ENST00000396082 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
UPK3A-202ENST00000396082 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
UPK3A-202ENST00000396082 PMAIP1Q13794 54 aa4.89□□□□□ -1.63
UPK3A-202ENST00000396082 MT3P25713 68 aa4.87□□□□□ -1.63
UPK3A-202ENST00000396082 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
UPK3A-202ENST00000396082 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
UPK3A-202ENST00000396082 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
UPK3A-202ENST00000396082 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
UPK3A-202ENST00000396082 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
UPK3A-202ENST00000396082 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
UPK3A-202ENST00000396082 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
UPK3A-202ENST00000396082 AHNAKQ09666 5890 aaKnown RBP4.48□□□□□ -1.69
UPK3A-202ENST00000396082 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
UPK3A-202ENST00000396082 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
UPK3A-202ENST00000396082 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
UPK3A-202ENST00000396082 SVIPQ8NHG7 77 aa4.24□□□□□ -1.73
UPK3A-202ENST00000396082 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
UPK3A-202ENST00000396082 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
UPK3A-202ENST00000396082 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
UPK3A-202ENST00000396082 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
UPK3A-202ENST00000396082 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
UPK3A-202ENST00000396082 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
UPK3A-202ENST00000396082 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
UPK3A-202ENST00000396082 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
UPK3A-202ENST00000396082 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
UPK3A-202ENST00000396082 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
UPK3A-202ENST00000396082 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
UPK3A-202ENST00000396082 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
UPK3A-202ENST00000396082 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
UPK3A-202ENST00000396082 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
UPK3A-202ENST00000396082 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
UPK3A-202ENST00000396082 PRM1P04553 51 aa2.94□□□□□ -1.94
UPK3A-202ENST00000396082 INE1O15225 51 aa2.56□□□□□ -2
UPK3A-202ENST00000396082 A0A0A0MQY5 61 aa2.55□□□□□ -2
UPK3A-202ENST00000396082 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
UPK3A-202ENST00000396082 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
UPK3A-202ENST00000396082 H3BS24 57 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 107.6 ms