RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 SVIPQ8NHG7 77 aa5.81□□□□□ -1.48
SNCA-205ENST00000394991 A0A1B0GU69 56 aa5.78□□□□□ -1.48
SNCA-205ENST00000394991 MT1GP13640 62 aa5.75□□□□□ -1.49
SNCA-205ENST00000394991 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
SNCA-205ENST00000394991 ATP5EP56381 51 aaPredicted RBP5.72□□□□□ -1.49
SNCA-205ENST00000394991 KRTAP5-4Q6L8H1 288 aa5.72□□□□□ -1.49
SNCA-205ENST00000394991 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
SNCA-205ENST00000394991 MT1MQ8N339 61 aa5.68□□□□□ -1.5
SNCA-205ENST00000394991 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
SNCA-205ENST00000394991 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
SNCA-205ENST00000394991 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
SNCA-205ENST00000394991 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
SNCA-205ENST00000394991 A8MU10 97 aa5.63□□□□□ -1.51
SNCA-205ENST00000394991 PRR15LQ9BU68 103 aa5.63□□□□□ -1.51
SNCA-205ENST00000394991 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
SNCA-205ENST00000394991 TMEM258P61165 79 aa5.6□□□□□ -1.51
SNCA-205ENST00000394991 MT1LQ93083 61 aa5.59□□□□□ -1.51
SNCA-205ENST00000394991 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
SNCA-205ENST00000394991 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
SNCA-205ENST00000394991 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
SNCA-205ENST00000394991 UQCR11O14957 56 aa5.43□□□□□ -1.54
SNCA-205ENST00000394991 KRTAP20-2Q3LI61 65 aa5.43□□□□□ -1.54
SNCA-205ENST00000394991 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
SNCA-205ENST00000394991 TNP1P09430 55 aa5.4□□□□□ -1.54
SNCA-205ENST00000394991 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
SNCA-205ENST00000394991 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
SNCA-205ENST00000394991 PSPHP1O15172 72 aa5.3□□□□□ -1.56
SNCA-205ENST00000394991 V9GYY9 64 aa5.3□□□□□ -1.56
SNCA-205ENST00000394991 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
SNCA-205ENST00000394991 Q1T7F1 81 aa5.25□□□□□ -1.57
SNCA-205ENST00000394991 K7ERS5 55 aa5.23□□□□□ -1.57
SNCA-205ENST00000394991 PCP4P48539 62 aa5.22□□□□□ -1.57
SNCA-205ENST00000394991 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
SNCA-205ENST00000394991 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
SNCA-205ENST00000394991 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
SNCA-205ENST00000394991 A6NED7 52 aa5.12□□□□□ -1.59
SNCA-205ENST00000394991 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
SNCA-205ENST00000394991 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
SNCA-205ENST00000394991 MUC5ACP98088 5654 aa4.96□□□□□ -1.61
SNCA-205ENST00000394991 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
SNCA-205ENST00000394991 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
SNCA-205ENST00000394991 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
SNCA-205ENST00000394991 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
SNCA-205ENST00000394991 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
SNCA-205ENST00000394991 MUC5BQ9HC84 5762 aaPredicted RBP4.89□□□□□ -1.63
SNCA-205ENST00000394991 ROMO1P60602 79 aa4.87□□□□□ -1.63
SNCA-205ENST00000394991 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.85□□□□□ -1.63
SNCA-205ENST00000394991 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
SNCA-205ENST00000394991 MT1AP04731 61 aa4.74□□□□□ -1.65
SNCA-205ENST00000394991 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
SNCA-205ENST00000394991 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
SNCA-205ENST00000394991 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
SNCA-205ENST00000394991 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
SNCA-205ENST00000394991 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
SNCA-205ENST00000394991 BRK1Q8WUW1 75 aa4.5□□□□□ -1.69
SNCA-205ENST00000394991 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
SNCA-205ENST00000394991 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
SNCA-205ENST00000394991 MT3P25713 68 aa4.32□□□□□ -1.72
SNCA-205ENST00000394991 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
SNCA-205ENST00000394991 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SNCA-205ENST00000394991 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
SNCA-205ENST00000394991 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
SNCA-205ENST00000394991 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
SNCA-205ENST00000394991 LCE1BQ5T7P3 118 aa3.92□□□□□ -1.78
SNCA-205ENST00000394991 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
SNCA-205ENST00000394991 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
SNCA-205ENST00000394991 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
SNCA-205ENST00000394991 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
SNCA-205ENST00000394991 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
SNCA-205ENST00000394991 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
SNCA-205ENST00000394991 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
SNCA-205ENST00000394991 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
SNCA-205ENST00000394991 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
SNCA-205ENST00000394991 INE1O15225 51 aa2.8□□□□□ -1.96
SNCA-205ENST00000394991 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
SNCA-205ENST00000394991 PRM1P04553 51 aa2.51□□□□□ -2.01
SNCA-205ENST00000394991 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 73.9 ms